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Finding the Fermenters
Harnessing BER-funded data resources, researchers built an interactive and … including the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … browser that allows other researchers to study the genomes and predict the metabolic abilities of these …
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Calculating the Costs of Multiple Switchgrass Gene Copies
Scientists have discovered that the candidate bioenergy feedstock switchgrass has adapted … and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … This means it contains more than two copies of the genome , which can have pronounced ecological and …
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Exploring the Diversity of the American Prairie’s Switchgrass
A tall native plant of the North American prairie, … potential biofuel feedstock. But switchgrass has a complex genome and, as a species, encompasses dizzying diversity. …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
Bacterial enzymes play second fiddle to those from fungi when … doing the job? By analyzing the enzymes present in the complex organic matrix of the forest floor, a team of … and metatranscriptome sequences, as well as individual reference fungal genome sequences assembled as part of its …
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Micro-Scale Applications Group
The Micro-Scale Applications group explores the genetic makeup of natural … technology in order to enhance the quality of single-cell genomes and directly link functional information with … DNA amplification, and sequence analysis to recover the genomes of uncultivated microbes. We also apply labeling …
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A Redesign for Yeast’s Genome, Chromosome by Chromosome
To engineer yeast to do more, and understand genomes in general, Jef Boeke, Weimin Zhang …
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JGI@25: Roots of a Mutualist Relationship
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … energy and environmental challenges. In March 2008, the genome sequence of the forest fungus Laccaria bicolor was …
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Ancient Algae Reveal Secrets of Plant Evolution
Research uncovers the genetic foundations that helped plants … tolerance and multicellularity enabled plants to develop complex structures and adapt to changing environments — … Program of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Igor Grigoriev
Dr. Grigoriev joined the DOE Joint Genome Institute in 2003, following his postdoctoral training at UC Berkeley and work in the pharmaceutical … of mushroom development reveals conserved genes behind complex multicellularity in fungi. Proc Natl Acad Sci U S A. …
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Microbial Genomics & Metagenomics (MGM) Workshop
Registration has closed.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is offering a five-day workshop on … designed to familiarize users with the Integrated Microbial Genomes & Microbiomes (IMG/M) data and workflows for …
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How Filamentous Fungi Sense Food
Tracing gene regulatory networks in the model fungus  … them to efficiently break down the wide array of simple and complex components present in plant biomass. This is of … researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Frequently Asked Questions: Project Management
Eukaryotic projects: Kerrie Barry or Vivian Ng Prokaryotic projects: Tijana Glavina del … listed on the “info” page for that organism on the Genome Portal . … You can view the status of all public projects on the JGI Genome Portal . The PI and all authorized users can also …
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