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… Large-scale comparative analysis leads to identification of … collaborated with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … collapsed, while these issues are not commonly seen with reference isolates. “For secondary metabolite discovery in …

… Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. We revisited a … Commissioned for the JGI’s 25th anniversary, the JGI mural references dozens of iconic JGI contributions to advancing … Notable Stories …

… Meta-omics datasets show that CRISPR-Cas systems determine … are abundant and yet exceptionally small, with mini genomes to match. As a result, they cannot process all of … archaeal hosts release organic carbon. Understanding these complex symbioses between organisms feeds into a better …

… Gardeners and farmers around the country recognize that crop … Laboratory (Berkeley Lab), has produced a high-quality reference sequence of the complex switchgrass  genome using samples collected at these … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …

… Learn more about JGI’s  MycoCosm data portal , an interactive collection of sequenced fungal genomes, omics data and comparative analysis tools. … Q1. Are all based on PFAM classification-only and/or other reference DB (citable)? Q2. Is it possible to download these …

… For the first time, a team analyzes the transcriptomes of a lichen fungus and alga … For the first time, a team has analyzed in parallel the genomes and transcriptomes of both partners to better … This work was supported by an intramural seed grant (IGSP 2008001) to …

… Sequence-based studies — from metagenomics to single-cell work — have … The Impact In their existence as large, cosmopolitan, and complex parasites, giant viruses often infect microeukaryote … viruses in sequence data is read-mapping: using giant virus reference genomes to search for giant viruses in metagenomic …

… DOE user facilities EMSL and JGI announce FY 2020 collaborative FICUS projects. … Molecular Sciences Laboratory (EMSL) and the  DOE Joint Genome Institute (JGI)—have selected 11 proposals for … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …

… A “bait and hook” single-cell genomic approach to … by Tanja Woyke at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … tested the approach on bacterial laboratory models to set a reference for its performance, and then applied it to …