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Complete genome sequence of the thermophilic, hydrogen-oxidizing Bacillus tusciae type strain (T2T) and reclassification in the new genus, Kyrpidia gen. nov. as Kyrpidia tusciae comb. nov. and emendation of the family Alicyclobacillaceae da Costa and
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Simon Roux
… in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the development … Microbiology, Université Blaise Pascal, France M.S. in Data Analysis and Modeling for Life Sciences, Université Blaise … learning framework to maximize host prediction for metagenome-derived viruses of archaea and bacteria. PLoS Biology …
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Neha Varghese
… benchmark, and apply bioinformatics software to enable analysis and interpretation of genomic and metagenomic data … science and projects through implementation of advanced analysis pipelines and tools as well as development and …
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Strain Engineering
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Webinar: SIP technologies at EMSL and JGI
… Molecular Sciences Laboratory (EMSL) and the Joint Genome Institute (JGI) provide access to a variety of tools … at JGI and EMSL such as DNA-SIP, Protein SIP, Flux Balance analysis with metabolites, Isotope Ratio Mass Spectrometry, … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… enabled by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … the original methanogens were, but they were discovered by genome sequencing, which is a much less biased approach to … a doubt that the ability to make methane is far more widespread in nature than historically presumed — widening …
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JGIota: Looking Back at Sequencing for Soybeans
… The soybean is a crop that could boost biofuels and fertilize … fields. So in 2010, the JGI helped publish the original genome sequence for the soybean, Glycine max. With a full genome sequence, researchers have been able to look into …
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The JGI Data Portal: Improving User Experience
… “For thousands of scientists around the world, the JGI Genome Portal is a critical resource — it provides access to … more than 13 petabytes of data, accessible through the Genome Portal. “The task of making data more findable and … benefit. The Data Portal — an updated alternative to the Genome Portal — seeks to more broadly represent JGI’s data. …
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Atif Shahab
… laboratory information tracking, and enables efficient analysis and reporting of sequencing projects and their … solutions for large-scale sequencing projects and data analysis pipelines.  …
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Anuvia taps JGI for expertise to pinpoint products from beneficial soil microbes
… food and bioenergy security for a steadily growing worldwide population. Anuvia Plant Nutrients , a small Florida … partnering with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Boosting Small Molecule Production in Super “Soup”
… Program at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … of the study’s senior authors. “But this has been done most commonly in bacterial-based systems, and so one of the … the first time CRISPR-Cas9 had been used to modify a cell’s genome in order to create lysates with altered metabolic …
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Genome sequences of key bacterial symbionts of entomopathogenic nematodes: Xenorhabdus cabanillasii DSM17905, Xenorhabdus ehlersii DSM16337, Xenorhabdus japonica DSM16522, Xenorhabdus koppenhoeferii DSM18168, and Xenorhabdus mauleonii DSM17908
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