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Expanding Virophage Diversity
… a cysteine protease involved in capsid maturation. Recently reported in  Microbiome , researchers from the US Department of Energy (DOE) Joint Genome … By mining more than 14,000 publicly available metagenomic datasets in JGI’s  Integrated Microbial Genomes & …
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Genome sequence of the thermophilic fresh-water bacterium Spirochaeta caldaria type strain (H1T), reclassification of Spirochaeta caldaria, Spirochaeta stenostrepta and Spirochaeta zuelzerae in the genus Treponema as Treponema caldaria comb. nov.,
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Whole Genome Analyses Suggests that Burkholderia sensu lato Contains Two Additional Novel Genera (Mycetohabitans gen. nov., and Trinickia gen. nov.): Implications for the Evolution of Diazotrophy and Nodulation in the Burkholderiaceae
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Fungus Fuels Tree Growth
… of Florida collected forest samples of poplar and soil from Washington and Oregon. The cuttings included genotypes from the DOE BioEnergy Science Center (BESC), predecessor … managed by UT-Battelle, LLC, under contract DE-AC05-00OR22725 for the DOE. The work conducted by the DOE Joint Genome …
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The exceptional form and function of the giant bacterium Ca. Epulopiscium viviparus revolves around its sodium motive force
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JGI announces second round of 2023 New Investigator awardees
From left to right: [above] Emma Bell, Mallory Choudoir, … for novel research projects — aligned with DOE missions and from PIs who have not led any previously-accepted proposals …
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Computationally Classifying Fungal Lifestyles
… class  Dothideomycetes includes fungi that obtain nutrients from decaying organic matter (saprobes), and many plant … the data provided. In this proof of concept test, the team reported that the algorithm was over 95% successful at … Vector Machine (SVM)-based prediction of lifestyle based on 6 gene clusters showed a >95 % accuracy in correctly …
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Exploring and Thinking Critically about Scientific Problems with JGI Interns
While summer interns at the JGI from multiple programs had their own goals to achieve, they …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… soil carbon. The process to harvest energy-generating peat from these boggy wetlands produces an estimated 5% of annual … protecting these ecosystems. … The work (proposal no. 10.46936/10.25585/60001030) (A.J.S.) conducted by the US … (DOE) Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE Office of Science User Facility, is supported …
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JGI Interns at UC Merced Earn CAMP Merit Awards
… in science and research, two undergraduate students from UC Merced recently had summer internships in Walnut … technology, engineering and math (STEM) fields. At the 2016 CAMP Statewide Undergraduate Research Symposium , held … CAMP students who earned outstanding research awards. From the 99 students who attended, representing 9 UC …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… as a reservoir for carbon compounds that plants generate from carbon dioxide they take in. In this way, encouraging … this symbiosis could improve the way soils store carbon from the atmosphere. For plants, boosting this relationship … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… as a reservoir for carbon compounds that plants generate from carbon dioxide they take in. In this way, encouraging … this symbiosis could improve the way soils store carbon from the atmosphere. For plants, boosting this relationship … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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