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… Dr. Cole is interested in studying how plants interact with their environment. Prior to joining the Joint Genome Institute, his focus was primarily on how plants … University of California, San Diego (PhD, 2011) Rensselaer Polytechnic Institute (B.S., 2006) … List of pubs available on NCBI …

… Every year, the JGI sequences around 35,000 samples — from plants, … the world. Most of those researchers send their samples in from afar, without ever hearing much about the sequencing lab. So today, Chris Daum …

… Machine learning methods were applied on sequenced fungal … that “taught” a computer how to classify 101 representative genomes of Dothideomycetes, the largest class of fungi, by … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … crop. In 2018, the JGI had sequenced and assembled the genomes of two varieties of a close relative and model … In a follow-up study , researchers focused on two types of naturally occurring switchgrass, those with 4 copies of the …

… In the summer of 2015, Adam Session was a postdoc working at the DOE Joint Genome Institute with Dan Rokhsar, who also holds a joint …

… Jan. 7: New Capabilities to Study Secondary Metabolism   … and their biosynthetic logics to be understood, accessing these untapped metabolic capabilities is often tedious … a given BGC in various hosts, availability of sequenced genomes, and computing resources needed to predict BGCs from …

… We count on livestock for food and fiber, but raising these animals also produces an atmosphere-warming gas: methane. Those emissions mainly come from gut …

… Antarctic algae need their vitamins; zinc fuels some of … researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility … Microglena on PhycoCosm Data Portal …

… The United States  is the world’s leading soybean producer , and soybeans … yields by as much as 90 percent. As part of the DOE Joint Genome Institute’s  2016 Community Science Program portfolio … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… In this episode, undergraduates adopt genomes that the JGI sequenced, but never … published in the literature. These students analyze the genomes, write reports, and publish first-author papers, …

… Learn more about PhycoCosm, the largest interactive collection of sequenced algal genomes, omics data and comparative analysis tools developed …