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Simon Roux
… the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the development … approaches to link viruses to their host(s), collaboration with JGI users for analyzing viral datasets, and the … learning framework to maximize host prediction for metagenome-derived viruses of archaea and bacteria. PLoS Biology …
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New Research Sheds Light on Diversity in the Deep Sea
… get any sunlight, and yet they still support a unique array of microorganisms adapted to living in extreme conditions. … where tectonic plates pull apart. As those plates separate, seawater seeps through cracks in the Earth’s crust and … Scientists with the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at …
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Progress Reports: 2002–2020
… Click the cards below to view downloadable pdfs of previous Progress Reports from the Joint Genome Institute.  …
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Promoting the Power of Viral Metagenomics
… An article summarizing the field of viral metagenomics, authored by JGI researchers Lee … , was  recently published in the journal  Annual Review of Biomedical Data Science . The following guest piece was … who study viruses that infect organisms much smaller than humans, like bacteria, this power is not surprising at all.  …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… National Ecological Observatory Network (NEON) is a network of field research sites designed to collect long-term open … ecosystems are changing.  Through the  “Facilities Integrating Collaborations for User Science” (FICUS) call between … available for research over 100,000 samples and specimens of over 60 different types of NEON samples and specimens per …
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Exploring Polymorphisms Created by Transposable Elements
… My project at the Joint Genome Institute (JGI) was to measure the polymorphisms that …
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IMA genome-F18
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A Plantiful Future: Xiaohan Yang
… Can plants help humans attain a renewable energy future? Can they help lock … carbon? Xiaohan Yang, a scientist at Oak Ridge National Laboratory, believes they can. And, what’s more, that using gene editing technology to conscientiously mix traits of different plant species will help us get there. …
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Phytozome: Tutorial Workshop from 2022 CROPS Conference @HudsonAlpha
… Institute for Biotechnology. Phytozome is the Plant Comparative Genomics portal of the Department of Energy Joint Genome Institute, and facilitates accurate and insightful …
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The Big Deal About Short Plants
… plant genetic sequences to what they do. But sequencing the genome of one short plant — fire moss — had an unexpected …
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Inaugural Critical Minerals & Materials Joint Research Portfolio Announced
… Setsuko Wakao, Meng Wang, and Allison Werner.   A total of 20 proposals were selected by the Joint Genome Institute (JGI) and the Molecular Foundry (TMF) for their collaborative user program. The portfolio of research proposals …
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The JGI Data Portal: Improving User Experience
… The human-centered, agile collaboration between the JGI and the information technology … from the other JGI Portals, as well. “For thousands of scientists around the world, the JGI Genome Portal is a critical resource — it provides access to … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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