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Matthew Kellom
… Matt is broadly interested in the interactions between microbial life and environment, and using … interest. Matt also supports various CSP and FICUS user projects for the Metagenome Program. …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… Protein annotations provide insights into environmental tendencies The Science The  Metagenome Stability Diagram — a tool within the Integrated … The work conducted by the US Department of Energy Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE Office …
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Neha Varghese
… bioinformatics software to enable analysis and interpretation of genomic and metagenomic data for JGI’s user community. She also provides support for user science and projects through implementation of advanced analysis …
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The JGI announces FY25 awardees for our Community Science Program Annual Call
… for our 2025 Community Science Program Annual Call. These projects include cutting-edge research into microbial … mats — to reveal how these systems adapt and contribute to global biogeochemical cycles. Additional … Deputy Director of JGI’s User Programs. “Many of these projects are large in scale and involve multiple …
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Streamlining Regulon Identification in Bacteria
… RIViT-seq technology could speed up associating transcription factors with their target genes. The Science Regulons are … in Streptomyces coelicolor . The Impact As an integrative genome science user facility, connecting genes to functions … of the mission of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Ben Bowen
… Specializing in mass spectrometry-centered projects, Dr. Bowen’s work focuses on developing high-performance computing workflows and … for advanced analysis, modeling, and data integration. Dr. Bowen’s expertise in spectral alignment, molecular … Arkansas, Fayetteville, Chemical Engineering Ph. D. – Arizona State University, Tempe, Chemical Engineering …
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Mindfully Moving JGI
… JGI is in the process of shifting its operations from Walnut Creek to the heart of the Berkeley Lab campus. By Friday, October 18, the production sequencing labs in Building 100 were silent. Twenty years … away in another city and county began more than three years ago. For JGIers, the moving process began in 2017 with …
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JGI announces 2024 New Investigator portfolio
… The JGI is eager to work and share our tools with a widening circle of … That’s why each year we look for novel research projects — aligned with DOE missions and from PIs who have not led any previously-accepted …
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A Mentor’s Perspective on Training the Next Generation
… JGI from all parts of the globe to gain lab experience and contribute to ongoing projects. In one way or another, they’ve all mentioned how …
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Dispatches From JGI Interns
… Every summer, the flagship JGI-UC Merced Internship Program invites … and graduate students to engage in real, impactful research projects with JGI mentors. In this episode, hear two interns … cohort describe their deep dives into genomics, computational tools, and big data.  …
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JGI announces first round of 2023 New Investigator awardees
… The JGI is eager to work and share our tools with a widening circle of … That’s why twice each year we look for novel research projects — aligned with DOE missions and from PIs who have not led any previously-accepted … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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JGI Hosts GPU Hackathon in May
… high-performance computing resources, an upcoming hackathon led by the Oak Ridge Leadership Computing Facility … (OLCF), NVIDIA, and the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user … community,” said JGI Chief Informatics Officer Kjiersten Fagnan of the upcoming event. “The tools we use to process …
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