Search

Marcel is in charge of several production pipelines (gene calling, functional … annotation and methylomics) that run on microbial genomes and metagenomes. He also works on automating … intra-department data exchange and assists with large scale computations on R&D projects. …

Learn more about MycoCosm, a data portal with over 2,000 fungal genomes and multi-omics datasets, equipped with interactive …

A quick snippet on Antonio Camargo and Simon Roux, a few of the JGI researchers behind software that finds plasmids and viruses within microbial genomes. As mobile genetic elements like viruses spread …

… they adapt to their ever-changing environments better? We could unlock new innovations to drive more productive food, medicine, and bioenergy crops. But most available genomes are from narrow swaths of the plant tree of life. One project aims to change that. …

Register here The workshop is addressed to students and professionals of biology, biomedical research, the health … related fields who are interested in learning and sharing concepts, tools and research results in genomics, … devoted to training in the use of the Integrated Microbial Genomes & Microbiomes (IMG/M) system, presented by Natalia …

… the DOE JGI hosted 10 interns who came from a wide range of backgrounds. Many of them spent the summer crunching genomic data at a computer; a few had the opportunity to spend time out in the … summer were: Rida Ali, who worked with T.B.K. Reddy on the Genomes OnLine Database; Sarah Fruchart , who worked with …

Register for the meeting here. Here are some sessions of interest (all times in PST unless otherwise noted): … research and tips for submitting successful proposals: Collaborate With a U.S. DOE User Facility: Learn About … context for thousands of newly sampled microbial genomes from North American watersheds (Invited)” 4pm CST …

Dr. Udwary serves as a computational biologist for JGI’s Secondary Metabolites … group. His research interests lie in use and development of bioinformatics tools for elucidation of biosynthetic gene … (1996) … List available on Google Scholar … Education … Publications …

… efforts to expand the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass … KB, Bowen BP, Olson HM, Purvine SO, Salamov A, et al. Anaerobic gut fungi are an untapped reservoir of natural … Sci Rep. 2013;3: 1656. … Education … Selected Publications …

Dr. Bowen’s work focuses on developing high-performance computing workflows and integrating mathematics and … bioenergy and environmental objectives. … BS – University of Arkansas, Fayetteville, Chemical Engineering Ph. D. – … Google Scholar. … Education … Awards and Honors … Selected Publications …

… began working with JGI in 2012 as a NERSC bioinformatics computing consultant, after completing a petascale … closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was appointed CIO of the JGI in … … About the JGI Chief Informatics Officer … Selected Publications … Awards and Honors …