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… Analysis of haloarchaeal metagenomes broadens understanding of Antarctic biogeography. … genomic variation in haloarchaea, they also characterized metagenomes (collections of partial genomes) from six … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is …

… In this episode, undergraduates adopt genomes that the JGI sequenced, but never published in the literature. These students analyze the genomes, write reports, and publish first-author papers, … Escobar (California State San Marcos) about how the Adopt-A-Genome project got started. Plus, Kalyani Maitra (California …

… the largest interactive collection of sequenced algal genomes, omics data and comparative analysis tools developed by the Joint Genome Institute (JGI), a US Department of Energy Office of …

… multiple institutions have sequenced and analyzed the genome of an alga that thrives in saltwater (halotolerant) … researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Labs to screen, characterize, sequence and then analyze the genomes and multi-omics datasets for algae that can be used …

… Genomes from uncultivated bacteria offers clues to ancestral … teams joined forces and data sets to describe bacterial genomes for related (“sibling”) lineages Margulisbacteria … Paula Matheus Carnevali was working with a group of metagenome-assembled genomes (MAGs) dubbed Margulisbacteria, …

… The JGI’s Genomes OnLine Database celebrates 25 years as a vital … The Science Since its launch 25 years ago, the  Genomes OnLine Database has matured from six projects on a … carried out at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …

… consequences of microbe-microbe interactions. Using metagenomes recovered directly from environmental samples and … in East Antarctica and enriched for native microbes. Metagenomes from enrichment cultures were sequenced and … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is …

…   Visualizing a novel, candidate viral genome found in the deep subsurface ecosystem. The Science … by combining a study of microbial communities (metagenomics) and a chemical labelling approach. The Impact … a targeted technique called virusFISH. Using fluorescently tagged probes, the team was able to visualize the behavior …

… Evaluation of Binning Tools for Microbial Eukaryotes in Metagenomes … Cross Species Comparison of Plant Single-cell Transcriptomes of Rice and Arabidopsis … Making Big Data Metagenomic Clustering Scalable … Pan-genome Graphs: Approaches for Complete Categorization of …

… Mini-Metagenomics Approach Helps Identify Novel Archaeal Methane … Biohub, and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user … Obsidian Pool hot spring. The researchers applied mini-metagenomics to these samples by sorting the microbes into …

… Northen’s research is focused on using metabolomics to link genomes with environments to understand how webs of microbes … Schadt, C., Martin, S., Carrell, A. et al. An integrated metagenomic, metabolomic and transcriptomic survey of Populus … Wang G et al. Chassis-Independent Recombinase-Assisted Genome Engineering Enables Rapid Activation of Biosynthetic …

… year, the JGI team reported the first closed and finished genome derived from an uncultured bacterial single cell – a … oil plume from Deepwater Horizon oil spill led to a draft genome of the first deep-sea, oil-eating bacterium from a … of the tree of life. Used in tandem over the years, metagenomics and single cell genomics have afforded JGI users …