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Conserved genomic collinearity as a source of broadly applicable, fast evolving, markers to resolve species complexes: A case study using the lichen-forming genus Peltigera section Polydactylon
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Cold adaptive traits revealed by comparative genomic analysis of the eurypsychrophile Rhodococcus sp. JG3 isolated from high elevation McMurdo Dry Valley permafrost, Antarctica
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… researchers focused on the full composition of genes, or pangenome, of the model plant  Marchantia polymorpha. Commonly … 35 major evolutionary plant lineages in the  Open Green Genomes Initiative , a project supported by the U.S. … framework provided by these high quality reference genome sequences could help researchers better understand related …
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The JGI Data Portal: Improving User Experience
… “For thousands of scientists around the world, the JGI Genome Portal is a critical resource — it provides access to … more than 13 petabytes of data, accessible through the Genome Portal. “The task of making data more findable and … benefit. The Data Portal — an updated alternative to the Genome Portal — seeks to more broadly represent JGI’s data. …
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Anuvia taps JGI for expertise to pinpoint products from beneficial soil microbes
… partnering with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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The Genome of the Acid Soil-Adapted Strain Rhizobium favelukesii OR191 Encodes Determinants for Effective Symbiotic Interaction With Both an Inverted Repeat Lacking Clade and a Phaseoloid Legume Host
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A User-Centered Approach to Accessing JGI Data
… metadata criteria. Wilson said that the Data Portal and  Genome Portal will continue to run in parallel for now. Eventually, he added, the Genome Portal will be retired once the same features are … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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The complete mitochondrial genome of the conifer needle endophyte, Phialocephala scopiformis DAOMC 229536 confirms evolutionary division within the fungal Phialocephala fortinii s.l. – Acephala appalanata species complex
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The molecular dimension of microbial species: 3. Comparative genomics of Synechococcus strains with different light responses and in situ diel transcription patterns of associated putative ecotypes in the Mushroom Spring microbial mat
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… I’m Alison Takemura at the US Department of Energy Joint Genome Institute, or JGI.  Two special days occur in April: … I recently caught up with Karolina at the Plant and Animal Genomes, or PAG conference, when in-person meetings were … Karolina’s quest in a future episode of our JGI podcast, Genome Insider. I’m Alison Takemura. See you next time. …
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Whole Genome Analyses Suggests that Burkholderia sensu lato Contains Two Additional Novel Genera (Mycetohabitans gen. nov., and Trinickia gen. nov.): Implications for the Evolution of Diazotrophy and Nodulation in the Burkholderiaceae
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Novel heavy metal resistance gene clusters are present in the genome of Cupriavidus neocaledonicus STM 6070, a new species of Mimosa pudica microsymbiont isolated from heavy-metal-rich mining site soil
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