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2025 Progress Report
… Biological and Environmental Research program, the Joint Genome Institute provides advanced genomic capabilities, …
Learn more
Accelerating Metagenomics Discoveries with Deep Learning
… biologist at the US Department of Energy (DOE) Joint Genome Institute (JGI), presented on generating vector … to vectorize protein sequences. Sevim is part of the JGI Genome R&D Group and is one of more than 100 scientists and … contigs (inferred chromosomal sequences in mixed-genome samples) with a new tool called MetaGNN (Prashant …
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Triggering Morel Fruiting
… Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … external source.  The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information … were sequenced and annotated by a collaborative team. The genome sequences and annotations are available on JGI’s …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… Laboratory, and the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User … usable for conventional food crops. For that reason, its genome was sequenced by the JGI in 2009 and it is considered … due to the DNA sequence that makes up an individual’s genome. The genes of sorghum plants are likely responsible …
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JGI User Executive Committee Expands
… Committee (UEC) of the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User … different environments. He’s been involved in several plant genome projects through the Community Science Program. As a … encourage more plant proposals and provide feedback on pangenome tool development. Maurice is a fungal evolutionary …
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JGI Accepts 17 Proposals for Community Science Program
… (CSP) call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … international collaboration that produced the reference genome sequence for Eucalyptus grandis. Accessing recently … University is studying microbial metabolism in the Antarctic Peninsula. Additionally, the proposal from Viola …
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Ancient Algae Reveal Secrets of Plant Evolution
… Program of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Laboratory (Berkeley Lab), scientists sequenced the genomes of four  Zygnematophyceae algae, which were isolated … in improving plant resilience and productivity. The algal genomes sequences are available on the JGI’s  PhycoCosm …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… appointments at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … “The big surprise of the project was to realize that these genome copies that are spread throughout the whole cell are … more genes than most bacteria and hundreds of thousands of genome copies (polyploidy) that are spread throughout the …
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Green Algae Reveal One mRNA Encodes Many Proteins
… Laboratory, the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… trace its origins, the researchers engaged the DOE Joint Genome Institute (JGI), with support of the US Department of … effort was to decode the complex Phytophthora ramorum genome. The JGI generated the organism’s DNA code in tandem … of tens of millions of trees in California alone. With the genome sequence in hand, the UC team led the charge to …
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Busting the Unbreakable Lignin
… with researchers at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … RNA sequencing and alignment to the reference fungal  genome . The study’s pivotal NMR (nuclear magnetic … conducted by the U.S. Department of Energy Joint Genome Institute (https://ror.org/04xm1d337), a DOE Office …
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Gut Fungi: Unexpected Source of Novel Chemicals
… called natural products . Yet, combing through the genomes of four anaerobic fungal species has revealed, for … and Piromyces finnis . In work reported in 2017, the fungal genomes were sequenced by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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