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Metabolic Modeling of Fungi
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Large-scale genome sequencing of mycorrhizal fungi provides insights into the early evolution of symbiotic traits
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Calculating the Costs of Multiple Switchgrass Gene Copies
… outline the questions they asked – and answered – in the study that recently appeared in the Proceedings of the … , which can have pronounced ecological and evolutionary consequences. A previous study conducted by our research team … of switchgrass and is a key component in providing genetic variation available for selection to improve biofuel …
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Kjiersten Fagnan
… Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing … JGI workloads to run on supercomputing hardware and worked closely with staff to understand the data-intensive nature … Speaker at IBM Research in Almaden where she presented work related to distributed data and workflow management.  …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… at the Université des Antilles and a co-first author on the study, performed the 16S rRNA gene sequencing to identify and classify the prokaryote. “I … the bacterial cells on the molecular level. They amplified, sequenced and assembled the genomes. In parallel, Gros’ lab …
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Phylogenomic Analyses of Non-Dikarya Fungi Supports Horizontal Gene Transfer Driving Diversification of Secondary Metabolism in the Amphibian Gastrointestinal Symbiont, Basidiobolus
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Draft Genome Sequence of a Rare Smut Relative, Tilletiaria anomala UBC 951
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On the origin of bird’s nest fungi: Phylogenomic analyses of fungi in the Nidulariaceae (Agaricales, Basidiomycota)
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Development of an integrated transcript sequence database and a gene expression atlas for gene discovery and analysis in switchgrass (Panicum virgatum L.)
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IMG-ABC: new features for bacterial secondary metabolism analysis and targeted biosynthetic gene cluster discovery in thousands of microbial genomes
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Bacterial barcoding facilitates plant microbiome studies.
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Annotation of the Corymbia terpene synthase gene family shows broad conservation but dynamic evolution of physical clusters relative to Eucalyptus
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