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Geochemistry and Mixing Drive the Spatial Distribution of Free-Living Archaea and Bacteria in Yellowstone Lake
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CRAGE-CRISPR facilitates rapid activation of secondary metabolite biosynthetic gene clusters in bacteria
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CRISPR — a widespread system that provides acquired resistance against phages in bacteria and archaea
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Hydrazine Synthase, a Unique Phylomarker with Which To Study the Presence and Biodiversity of Anammox Bacteria
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Exploring novel alkane-degradation pathways in uncultured bacteria from the North Atlantic Ocean
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Activity-targeted metaproteomics uncovers rare syntrophic bacteria central to anaerobic community metabolism
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Learning to Look
… case, the machine “learned” to identify a certain type of bacterial viruses or phages called inoviruses, which are … and a unique chronic infection cycle. “We’re not sure why we systematically manage to miss them; maybe it’s due to … first worked on a reference dataset that included genome sequences known to be affiliated with the Inoviridae. “What …
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Year in Review: JGI’s 2018 Progress Report Available Now
… own Jon Bertsch. Microbes isolated from Mono Lake were sequenced by the JGI (isolates here , here and here ), and … mobility and to better understand their roles in the global sulfur cycle. Copies are available online – click here to go …
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Simon Roux
… development of novel computational tools to identify virus sequences, the design of new experimental approaches to link … prediction for metagenome-derived viruses of archaea and bacteria. PLoS Biology 21, e3002083 Roux et al., 2021. … of viral infection cycle in wild populations of green sulfur bacteria with long standing virus-host interactions. …
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JGI@25: Strengthening Soybean
… impressive environmental and energy advantages explain why soybean is a flagship genome of the JGI’s Plant Program. … first legume species with a published complete draft genome sequence. At the time, the vital global source of both … of seed oils as biofuel. After analyzing the original sequence, Gary Stacey of the University of Missouri said he …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… duplications, and even more ancient gene transfers from bacteria have all armed the plant with an array of defense … power of plants, and the lessons they can teach us, are why the U.S. Department of Energy (DOE) Joint Genome … richardii marks the first published manuscript of a genome sequence generated through the OGG. For a long time, C-fern …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… Single Cells Group helped better-understand what the sulfur-oxidizing, carbon fixing bacterium was doing in the … Nikos Kyrpides  and Simon Roux — features 600 genome sequences for Actinobacteria.  Woyke  was also one of three …
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