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ShotgunFunctionalizeR: an R-package for functional comparison of metagenomes
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Dynamic nitrogen fixation in an aerobic endophyte of Populus
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Emiley Eloe-Fadrosh
… Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in microbial ecology and metagenomics. Her current research focuses on leveraging thousands of metagenomic datasets from host-associated and … at the JGI. Click to learn more about the program's areas of focus, major initiatives and more.  …
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First Monoploid Reference Sequence of Sugarcane
… . The Science Most species are diploids and have two sets of chromosomes, one from each parent. In contrast, many crops have multiple sets of chromosomes … and their complex genomes are more difficult to sequence and assemble, in turn limiting the use of modern, …
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Activity‐Informed Network Analysis Reveals Keystone Microbes Shaping Freshwater Ecosystem Function
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Ancient Algae Reveal Secrets of Plant Evolution
… land over 600 million years ago. The Science By studying the genes of land plants’ closest algal relative,  Zygnematophyceae , … Berkeley National Laboratory (Berkeley Lab), scientists sequenced the genomes of four  Zygnematophyceae algae, which … Settlement Biomedical Research Enhancement Funds as part of a startup grant of the University of Nebraska Lincoln, …
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Tanja Woyke
… After studying the mechanism of action of antifungal natural products … she deciphered function and host-symbiont interplay using metagenomics. Taking on a Research Scientist position in … is the Microbial Science Program Head as well as our Deputy of User Programs. Click to learn more about the program's …
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Microbial life under ice: Metagenome diversity and in situ activity of Verrucomicrobia in seasonally ice‐covered Lakes
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DAS Tool for Genome Reconstruction from Metagenomes
… and improved upon a tool that combines existing DNA sequence binning algorithms, allowing them to reconstruct … changes. Summary Researchers have been utilizing metagenomics as a way to study a collection of hard-to-culture microbes, but the efficacy of this … The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the Office …
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Partial genome sequence of the haloalkaliphilic soda lake bacterium Thioalkalivibrio thiocyanoxidans ARh 2T
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What Happens Underground Influences Global Nutrient Cycles
… 2020 collaborative FICUS projects. Through the Facilities Integrating Collaborations for User Science (FICUS) program, two Department of Energy (DOE) Office of Science national user … fluctuating environmental conditions. The team aims to functionally link gene families to photosynthesis and …
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Metatranscriptomic Analyses of Diel Metabolic Functions During a Microcystis Bloom in Western Lake Erie (United States)
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