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JGI@25: From Life at the Extremes to Editing Genomes
… revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science … collection of publicly accessible metagenomic datasets from a wide variety of ecosystems around the world, … doi: 10.1038/s41467-017-01408-4. Tyson GW et al. Community structure and metabolism through reconstruction of …
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MicroSyn: A user friendly tool for detection of microsynteny in a gene family
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Taking Stock of the Known and Unknown Microbial Space
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … regulating global nutrient cycles. The information gained from understanding the interactions between microbes, hosts, … representation. “When it comes to isolate genome data, our real-world touchstones, we’re just scratching the …
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CalTeach
… majors interested in developing a deep understanding of STEM teaching & learning. Their coursework focuses on STEM pedagogy, educational theory and … simultaneously with their undergraduate degree. Our interns say their experiences allowed them to:  Learn …
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Unusual Metabolism and Hypervariation in the Genome of a Gracilibacterium (BD1-5) from an Oil-Degrading Community
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Metagenomes and Metagenome-Assembled Genomes from Microbial Communities Fermenting Ultrafiltered Milk Permeate
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Marine Microbe Contains Multitudes
… genomics reveals one bacterial species is made of four ecologically distinct groups with different lifestyles. … But SAR324 can be found throughout the water column, from the warm, well-lit surface, to the blue-lit twilight … Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Polysaccharide niche partitioning of distinct Polaribacter clades during North Sea spring algal blooms
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … seed dispersal in wild populations for the first time.  “To our knowledge, nobody has ever discovered a dispersal gene … are genes out there that affect this phenotype.’”  Results from A “Massive Amount” of Sequencing  Seed dispersal is …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
Dan Rokhsar, who also holds a joint appointment with the University of California, Berkeley. Nowadays, Session is an … a condition known as polyploidy. The multiple copies arise from past genome duplication, which occurs in two basic … genes from all possible candidate ancestors are available. Our method clearly identifies the four subgenomes based on …
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The gold-standard genome of Aspergillus niger NRRL 3 enables a detailed view of the diversity of sugar catabolism in fungi
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Game On: High School Students Drive Everglades Metagenomics Study
… class at Florida’s Boca Raton Community High School. The course had a defined set of objectives, and started with an … Joint Genome Institute (JGI) , a DOE Office of Science User Facility. She took special interest in it because she … that the project had already received enthusiastic support from the JGI Director, Nigel Mouncey. Jonathan credits his …
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