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… SIP labwork and analysis can be very demanding.  The JGI offers SIP analysis to make these experiments accessible to … This episode, Rex Malmstrom (JGI), and Roli Wilhelm (Purdue University), share a few different ways they're working to … more reusable, and more insightful, for the future of studying microbial communities.   …

… the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the development of novel computational tools to identify virus sequences, … learning framework to maximize host prediction for metagenome-derived viruses of archaea and bacteria. PLoS …

… Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of the product and deliverables as well as target cycle … metabolites and unidentified features in spectra. 167/214 Metagenome Metatranscriptome Environmental transcript sequence …

… A collaborative team led by Geoffrey Schiebinger at the University of British Columbia, Philip Benfey at Duke University and Uwe Ohler at   Humboldt Universität zu Berlin … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence …

… for User Science (FICUS) program, two Department of Energy (DOE) Office of Science national user … and bioproducts. For example, Sabeeha Merchant of the University of California, Berkeley studies the alga  … interactions focus area comes from Malak Tfaily of the University of Arizona. Her team aims to use data from an …

… viruses outnumber the microbes by at least another order of magnitude. For years, scientists at the DOE Joint Genome … is part of another project led by Owen White at the University of Maryland, Baltimore. Both projects will build … CheckV , which assesses the quality and completeness of metagenome-assembled viral genomes ( Nature Biotechnology , …

… Institute.  The Science Researchers report the discovery of miniature Clustered Regularly Interspaced Short … by a team led by Jennifer Doudna’s group at the University of California (UC), Berkeley, which is also … by searching for Cas12d homologs across IMG/M’s assembled metagenomic data. It turned out that some of these were …

… get any sunlight, and yet they still support a unique array of microorganisms adapted to living in extreme conditions. … that live there.  Researchers from Portland State University and the University of Wisconsin-Madison collected … at Lawrence Berkeley National Laboratory, contributed metagenomic sequencing to the study as well as  genome …

… Nov. 2: Getting Credit for Scientific Contributions of Any Size What is considered to be a scientific … students (and their mentors) how to begin establishing a professional presence through getting credit for any scientific contribution they make, whether as part of a course or internship, and before ever publishing a …

… Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is … Area are also co-located in the IGB. Vision The vision of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office …

… JGI’s  MycoCosm data portal , an interactive collection of sequenced fungal genomes, omics data and comparative … there a tool in this platform to search fungal genomes in metagenomes? A: Search in metagenomes is available from another JGI portal, IMG:  … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …