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… view of both plant and fungal activity at different stages of this symbiosis. Within that activity, Serrano, Cole …

… al. 2018. The genomic landscape of molecular responses to natural drought stress in Panicum hallii . Nature …

… al (2021) Anaerobic gut fungi are an untapped reservoir of natural products. Proc Natl Acad Sci U S A. …

… to pursue her research interests in microbial ecology and metagenomics. Her current research focuses on leveraging thousands of metagenomic datasets from host-associated and environmental … Scripps Institution of Oceanography. She stepped into the Metagenome Program Lead position in 2017. She also leads the …

… sequence data. Dr. Schulz employs multi-omics (metagenomics, metatranscriptomics, single cell genomics and … a single-cell-based discovery pipeline and enrichment metagenomics for terrestrial protists. These approaches enable … of Vienna (Austria) … Krinos et al. 2024. Time-series metagenomics reveals changing protistan ecology of a temperate …

… comparative analysis platforms for microbial genomes and metagenomes (IMG). He became the Metagenomics Program head in 2010 and has the combined Microbial Genomes and Metagenomes Program since 2011. Prior to joining the DOE Joint …

… in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the … learning framework to maximize host prediction for metagenome-derived viruses of archaea and bacteria. PLoS … 2020. CheckV assesses the quality and completeness of metagenome-assembled viral genomes. Nature biotechnology 39, …

His group also handles the Stable Isotope Probing (SIP) Metagenomics pipeline  that reveals in situ functional … et al. 2024.  Spatial co-transcriptomics reveals discrete stages of the arbuscular mycorrhizal symbiosis. Nature Plants … Genome-wide selective sweeps and gene-specific sweeps in natural bacterial populations. ISME Journal 10 (7), 1589 …

Schadt, C., Martin, S., Carrell, A. et al. An integrated metagenomic, metabolomic and transcriptomic survey of Populus … CL, et al. Anaerobic gut fungi are an untapped reservoir of natural products. Proceedings of the National Academy of …