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Enlarging Windows into Understanding Gene Functions
JGI innovates protocol revealing how genetic variations in sequences affect traits. In a text file, the rows of … Laboratory (Berkeley Lab). And one of the tools that researchers can apply to study the transcription factors …
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Uncovering Novel Genomes from Earth’s Microbiomes
Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … technologies and computational methods in the past decade, researchers have uncovered genomes for just a small fraction …
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Disclaimer
NOTICE Information from this server resides on a computer system … Energy Joint Genome Institute is supported by the Office of Science of the U.S. Department of Energy under Contract No. …
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How Filamentous Fungi Sense Food
Tracing gene regulatory networks in the model fungus  Neurospora crassa . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to reconstruct and model gene regulatory pathways used by the …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
A special issue of Synthetic Biology celebrates research enabled by the JGI DNA Synthesis Science Program. Fashioning DNA outside a cell is key to interrogating what genes …
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iPHoP: A Matchmaker for Phages and their Hosts
…   To understand virus-host dynamics, computation helps fill in what cultivation can’t. The Science At … like bacteria, not humans. With metagenomic sequencing, researchers have found more of these viruses than ever …
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Finding the Fermenters
Harnessing BER-funded data resources, researchers built an interactive and comprehensive database … prokaryotes. The Science Most organisms use oxygen to convert food into energy. However, in environments with …
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Understanding Wildfire Recovery, Starting in Soil
A metagenomic look at the soil microbes present a year after a … a microbiome of bacteria, viruses and fungi process carbon and nitrogen, paving the way for future plants and trees … clearer picture of how burned ecosystems return to health, researchers have taken a look at microbial genomes across a …
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Doubling Down on Known Protein Families
Using a novel computational approach, researchers confirm microbial …
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Fungal Friends or Foes in Plant Roots
Uncovering associations between plant roots and fungi that can help or harm plant host health. The Science Researchers compared the genomes of fungi that colonize …
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Game On: High School Students Drive Everglades Metagenomics Study
In late June, Kathleen Lail, a member of JGI’s Sample Management Group, attended a conference in Florida to discuss a JGI pilot project … is in this soil? Jonathan had been reaching out to many researchers with the hope of getting support for a research …
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When “The Blob” Made It Hotter Under the Water
Data from marine heatwave event may foreshadow climate change impact on marine microbial communities. The Science A team of researchers tracked the impact of a large-scale heatwave …
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