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Gut Fungi: Unexpected Source of Novel Chemicals
… and commodity chemicals, as well as drop-in biofuels. This work shows that anaerobic fungi might be a new source of … , Neocallimastix californiae , and Piromyces finnis . In work reported in 2017, the fungal genomes were sequenced by … expressed genes translated into expected proteins. That work was done in collaboration with the Environmental …
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JGI@25: Building a Better Bean
… sequenced and analyzed the genome of the common bean. That work was published online June 8, 2014 in the journal Nature … of the JGI, McClean and Schmutz have continued their work together unlocking the powers of the bean. Though the JGI no longer works on food crops specifically, “[At the JGI] we do use …
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Crops as Tough as World Cup Turf
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… that estimate biogeochemical fluxes. Summary Previous work on microbial mats had primarily relied on culturing … pairs in the laboratory to study their interactions. This work,  recently published in  The ISME Journal , by … hosts, they’d likely have a hard time finding more. … The work conducted by the U.S. Department of Energy Joint Genome …
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Ancient Algae Reveal Secrets of Plant Evolution
… how early plants built upon an ancient genetic framework to thrive outside aquatic environments. The Impact A … are interconnected, suggesting that this genetic network was already in place in ancient algae. Essentially, … are available on the JGI’s  PhycoCosm portal. … This work was funded by the US National Science Foundation (NSF) …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… sorbed to the clays. Sandy soils are much more likely to work well for metabolomics.  Q:  What tool or method is … (secondary metabolomics), how can we map it into these networks? A: We use networks based on the fragmentation spectra of the metabolites …
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Doubling Down on Known Protein Families
… communities by looking at protein function within them. The work was led by a team of scientists at the U.S. Department … community now can use further. Let’s say somebody is working on soil environments or the human body — they may … of California, Berkeley were also involved in the work. Other authors on the paper are Fotis Baltoumas, Sirui …
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Access to Rock Star Scientists
The students’ research culminated in presentations on their work delivered during the 5th anniversary celebration of the … here is very kind and really open to talking about their work. It’s fun to be around people who are generous with … to rock star scientists who have done the groundbreaking work you’ve been reading about for years! And you can ask …
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User Executive Committee Charter
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A Plant Root Atlas for Tracking Developmental Trajectories
… the information with previously published datasets. The work was  recently published in the journal  Developmental … Axel Visel provided a broader perspective:  “ This exciting work is well aligned with the JGI’s growing efforts in … Cole, have been leading these efforts, which included two  workshops with resulting reports and a  perspective article …
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Alabama A&M Interns Access An Abundance of Knowledge
… student Ti’Yanna Watson and graduate student LaMonika Dent worked with JGI mentors Yi Zhai and John Vogel on … the plant microbiome. They also took part in many enriching workshops and networked with fellow interns and scientists alike. Want to …
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Partners
RNA extractions to support plant and other efforts. The JGI works closely with DOE computational facilities (e.g., the … Data Collaborative (NMDC)—to provide access to datasets, workflows, and tools to seamlessly expand data …
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