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Three Join the JGI User Executive Committee
Microbiome Data Collaborative (NMDC) Champion. As an early career investigator, she is committed to representing and advocating for early career users on the UEC. As a user of the JGI and the … the Department of Ecology, Evolution and Marine Biology at UCSB, where she leads a research group investigating the …
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An Integrated Dataset to Understand Ecosystem Interaction
… relationship between poplar trees and their microbial partners. The Science To help better understand how ecosystems work and how healthy they are, a recent data set  … nitrogen and carbon, as well as improving the tree’s production as a biofuel feedstock. Public accessibility to the …
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JGI@25: Stories from Intern Alumni
Ul-Hasan share how these experiences have influenced their career journeys.     …
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Draft Genome Sequences of Chlamydiales Bacterium STE3 and Neochlamydia sp. Strain AcF84, Endosymbionts of Acanthamoeba spp.
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Exploring Phages at JGI
… working at a national laboratory. However, through the JGI-UC Merced internship program, I was able to collaborate with …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… at Northwestern University, and researchers at the biotech company LanzaTech to develop a “cell-free” gene expression system. Developed through the JGI DNA synthesis Community … to both the project’s success and her own as an early career researcher. “We were able to study hydrocarbon …
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Dispatches From JGI Interns
Every summer, the flagship JGI-UC Merced Internship Program invites undergraduate and graduate …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… sequenced with sufficient resolution to analyze their structure. Scientists found both a gene likely important for … reproduce can help guide breeding efforts. For example, discovering genetic markers of sex enables scientists to … of XX. But, like some plant and songbird species, the system in shrub willow is flipped: females are heterogametic. …
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A Community Resource for Secondary Metabolite Researchers
… metabolites are useful in a variety of fields including biotechnology, medicine and agriculture. This comprehensive … the Integrated Microbial Genomes and Microbiomes (IMG/M) system known as IMG-ABC. That portal contained biosynthetic … it is a BGC repository that aspires to FAIR (findable, accessible, interoperable and reproducible) principles and …
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JGI@25: Strengthening Soybean
… but soybean ( Glycine max ) also has the advantage of reducing the need for nitrogen fertilizer. These impressive … immediately spurred further research and additional discoveries. Stacey noted that even prior to the sequence being … … We’re a long way there; we are developing traits with key partners, both Corteva and Bayer, and that’s going really …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… has already demonstrated CRAGE as a versatile engineering system that allows scientists to conduct genome-wide screens … JGI-developed genetic engineering technique CRAGE lands the cover of ACS Synthetic Biology. (Wayne Keefe/Berkeley Lab) … Lab) Newscenter story and this piece in  Current Opinion in Biotechnology . Now, CRAGE is being applied to other …
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Mission
… in studies of complex biological and environmental systems. We optimize our service to the community through … National Laboratory and the HudsonAlpha Institute for Biotechnology . We are located in the Integrative Genomics … microbiome processes.  Among the JGI’s largest dedicated partnerships are the DOE Bioenergy Research Centers , which …
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