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Comparative genomics of biotechnologically important yeasts
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Comparative Genomics of the Dormancy Regulons in Mycobacteria
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Novel Approaches Toward Scalable Composable Workflows in Hyper-Heterogeneous Computing Environments
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Ian Blaby
… Since 2019 Dr. Blaby heads the DNA synthesis platform at the Joint Genome Institute, where he leads three … on HTP DNA design and assembly, strain engineering and bioinformatic tool development/data analysis for synthetic biology and functional genomics. Prior to joining the JGI, he was a group lead at …
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Jane Grimwood Named HudsonAlpha Genomics Chair
… Spencer Chair in Genomics at the HudsonAlpha Institute for Biotechnology! Loretta Spencer served as a manyterm … large-scale multi-institutional JGI projects and resulting publications that Grimwood contributed to include: A 2021 … and biology of human chromosome 19 The DNA sequence and comparative analysis of human chromosome 5 The sequence and …
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PEATmoss (Physcomitrella Expression Atlas Tool): a unified gene expression atlas for the model plant Physcomitrella patens
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NAP: The Network Analysis Profiler, a web tool for easier topological analysis and comparison of medium-scale biological networks
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… how these hosts and hitchhikers coexist is key for understanding their impact on wider ecosystems, but … interactions are difficult to study in the lab. Metagenomics provides new views of these relationships.  … Archaea, bacteria, and viruses all operate in concert to form the foundation of this deep Earth ecosystem. For …
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Scaling Up Existing Skill Sets
… paired six UC Merced students with seven JGI researchers for bioinformatics internship opportunities in fields … the door for me in the sense that I learned many different tools in bioinformatics research. Also, it consolidated my … my JGI internship was the learning experience I got in computational research. Overcoming a huge learning curve to …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… available data, GenomeOcean employs artificial intelligence for cutting-edge genomic research — and is capable of … such as biosynthetic gene cluster structures. Zhong Wang, a computational biologist at the U.S. Department of Energy … — and primed for integration with artificial intelligence tools.  LLMs aren’t just for understanding the human …
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Phytozome: a comparative platform for green plant genomics
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Comparative genomics of clinical and environmental Vibrio mimicus
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