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Mapping the Earth’s Hidden Fungal Kingdom
… years, fungi have spread quietly throughout our planet. From the deepest ocean floors to Antarctic valleys, these … one of the world's most comprehensive collections of fungal genomes. A sweeping analysis published in Nature Reviews … Earth's fungal kingdom. The manuscript reviews about 200 publications linking evolutionary history and innovations …
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
… Accessing Resources at Multiple DOE User Facilities with a Single Proposal webinar, inviting researchers to apply for … program. Letters of Intent are due March 17, 2021. Q&A from the Webinar: Q(uestion): Who can apply for this … single cell capabilities range from traditional single cell sequencing and mini-metagenomics to more targeted …
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An Automated Tool for Assessing Virus Data Quality
… fragments and data quality. The Science Through advances in sequencing technologies and computational approaches, more … and more virus sequences are being recovered and identified from environmental samples (metagenomes). However, the quality and completeness of …
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Fourteen genome sequences from bacterial, environmental isolates from the Cotton Glacier stream, Antarctica
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Matt Blow
… R&D for production and user science. He received his Ph.D. from the Wellcome Trust Sanger Institute and Cambridge … to study genome regulation in human and other vertebrate genomes. When he joined the JGI, he worked as a project … Bowers et al. 2024. scMicrobe PTA: Near Complete Genomes from Single Bacterial Cells bioRxiv , 2024.01. …
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Reconstructing each cell's genome within complex microbial communities—dream or reality?
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Genome size, cell size, and the evolution of enucleated erythrocytes in attenuate salamanders
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Massive lateral transfer of genes encoding plant cell wall-degrading enzymes to the mycoparasitic fungus Trichoderma from its plant-associated hosts
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A roadmap for equitable reuse of public microbiome data
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… challenges.   Scanning the California oak woodlands from the air, large swaths of the bleached, skeletal remains … The disease is known more commonly as Sudden Oak Death or by its acronym, SOD. Of the dozens of Phytophthora species, … was released to the public in a highly-cited 2006 publication in the journal Science . This provided a …
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A Single Residue Switch Controls Isomer Selectivity in the Myxobacterial Isobonnadiene Synthase
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… Repertoire in Actinobacteria Over the years more than 3,400 genomes have been sequenced from curated DSMZ isolates, for which quality DNA has been … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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