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… The Science Within the archaeal domain, there is a group of tiny hitchhikers. These organisms are abundant and yet exceptionally small, with mini genomes to match. As a result, they cannot process all of the chemicals they need to survive. To fill in their …

… TBK Reddy gives an overview of the JGI's Genomes OnLine Database and why curated metadata matters. …

… See below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, … to soil carbon storage during simulated range shifts of plant-fungal symbionts … Elucidation of the gene regulatory networks governing terpenoid-mediated … Characterization of simplified soil communities with high and low carbon use …

… Highlighting the latest interactive version of the JGI’s plant data portal. On August 6, 2021,  version 12 of Phytozome will be retired, and  version 13 will become … website. Since May 2019, v12 has not had any additional genomes added to it, nor had any feature updates. Phytozome  …

… Science Program (CSP), researchers are developing a number of resources to build up Sphagnum as a plant model system … and researchers estimate that they hold about 25 percent of the world’s soil carbon. In high latitudes, sphagnum can … researchers are aiming to have two high quality reference genomes for peat-forming species that occupy different …

… Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the … habitats. The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information … attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … (INRAE). Today, there are nearly 200 mycorrhizal fungal genomes publicly available on the fungal portal MycoCosm, …

… to aid with genome assembly and transcriptome analysis of microbial, fungal, and plant research projects.  More … weight DNA) is an important factor as well for PacBio metagenomes. Q: How many PacBio metagenomes can I submit?  How … “regular” PacBio, since the low-input protocol involves PCR amplification of the library. 6mA and 4mC (~50x depth), 5mC …

… human chromosomes 5, 16, and 19. Following the completion of the Human Genome Project in 2003, he developed … assembly, and improvement strategies for de novo sequencing of eukaryotic organisms from simple yeasts to large vertebrate genomes.  For the past 13 years, Mr. Schmutz has directed …

… his backyard in Tennessee — the birds are chirping and a soft breeze ripples through the trees in his backyard. Originally from northern California and one of the first students to participate in the DOE Joint Genome … fine tune his approach. “I got a lot of that from Zhong.”   Publication: Carrell AA et al. Habitat-adapted microbial …

… online Oct. 11, 2023 in  Nature highlights the vast array of functional diversity of microbes through a novel approach to better understand … through the publicly available  Integrated Microbial Genomes & Microbiomes (IMG/M) database, they successfully … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …

… Genome annotations of two C. citriodora subspecies broaden understanding of the terpene synthase gene family across eucalypt … assembly of two Corymbia citriodora subspecies variegata genomes allowed researchers to study the conservation and … Sequencing and assembly data carried out by EMBRAPA as part of the  Corymbia  genome project was supported by FAPDF …