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Fungal & Algal Program
The Fungal & Algal Program explores the vast diversity of fungi and algae … to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
Journal publication caps JGI pilot project with fledgling Florida high school scientists. The Florida Everglades … ranging from wetlands to tree islands to cattails. In 2018, the US Department of Energy (DOE) Joint Genome …
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Hiroshi Otani
Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has been studying secondary metabolism in microbes, … A., and Eltis, L.D. (2016) The activity of CouR, a MarR family transcriptional regulator, is modulated through a … Mol. Microbiol. 87, 1223-1236. PubMed … Education … Publications …
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The role of zinc in the adaptive evolution of polar phytoplankton
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Crysten Blaby-Haas
Blaby-Haas joined the JGI in 2022 as lead of the Biomolecular Materials … diversification within the heme-binding split-barrel family. J Biol Chem  300(11), 107888. Grosjean N, Yee EF, … Google Scholar … Education … Awards and Service … Selected Publications …
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Tina Clarke
Ms. Clarke joined the Lab in 2007 as the Sr. Human Resources Division Partner for …
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A Collaboration to Improve Plant Genome Annotations Across Species
To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the … detailed functional annotations, protein homologs, plant family information, and a genome browser view of gene …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
Bacterial enzymes play second fiddle to those from fungi when it comes to breaking down tough plant fibers. The Science Walk in a temperate … fungi are breaking down plant fibers, like cellulose and lignin. Bacteria, on the other hand, appear to be ignoring …
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Sodalis ligni Strain 159R Isolated from an Anaerobic Lignin-Degrading Consortium
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A Community Resource for Secondary Metabolite Researchers
The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to the core set of "primary … more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence …
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Finding the Fermenters
Harnessing BER-funded data resources, researchers built an … National Institute of Food and Agriculture grant 2018-67015-27495, the United States Department of … phenotype and genotype of fermentative prokaryotes on IMG … Publication … Datasets … Datasets … Datasets …
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Secondary Metabolites Program
…   The JGI’s Secondary Metabolites Program focuses on the exploration of … growth, provide critical advantages to the organisms producing them, and are often involved in defense, nutrient … of cell-free based expression platforms: Only 10-20% of BGCs are expressed under standard laboratory …
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