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Annotation of metagenome short reads using proxygenes
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AmiGO: online access to ontology and annotation data
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MAGI: A Method for Metabolite Annotation and Gene Integration
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Building Sphagnum Genomic Resources
… model system focused on carbon cycling studies, rather than for food or fuel applications. The Impact Sphagnum’s impact … researchers are aiming to have two high quality reference genomes for peat-forming species that occupy different … – Sphagnum fallax and S. magellanicum. The draft genome for  S. fallax is already available on the  JGI plant …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… collaborated with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … senior author of the study and head of the JGI’s Microbiome Annotation Group. Many of these bacterial and archaeal … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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Construction of high resolution genetic linkage maps to improve the soybean genome sequence assembly Glyma1.01
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An improved genome of the model marine alga Ostreococcus tauri unfolds by assessing Illumina de novo assemblies
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Metabolomics Technology Group
… networks of environmental microbes and how they transform their environment. Research Team    … For further details, please reach out to the Group Lead …
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Intraspecific comparison and annotation of two complete mitochondrial genome sequences from the plant pathogenic fungus Mycosphaerella graminicola
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How Filamentous Fungi Sense Food
… Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to reconstruct … researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … fungi. The work also suggests a new approach to gene annotation, which then can be explored in depth for multiple …
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Predicted structural proteome of Sphagnum divinum and proteome-scale annotation
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Cataloging the Microbes that Manage the Health of River Systems
… Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the watersheds … States. They also provided multiple access points to the information. The team harnessed a community-science program to … National Laboratory. The JGI sequenced over 1,000 metagenomes and established standardized sequencing protocols so …
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