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Taking Stock of the Known and Unknown Microbial Space
… Metagenomic datasets could help map out microbial diversity hotspots Over the past few decades, advancements … cycles. The information gained from understanding the interactions between microbes, hosts, and their environments could be applied to multiple … Research (BER) missions. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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Intra‐species genetic variability drives carbon metabolism and symbiotic host interactions in the ectomycorrhizal fungus Pisolithus microcarpus
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JGI Hosts GPU Hackathon in May
… we will have available.” A maximum of six teams will be hosted at the Hackathon, with 1-2 mentors per team. …
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Natural Prodcast Episode 2: The Primer, Part 2
… in. — DAN: So secondary metabolites. I kind of inferred through the stories I told you about geosmin, which is a … derivatives of natural products.  ALISON: Like such a large diversity can have similar effects, I think is also really … at naturalprodcast.com Special thanks, as always, to my co-host, Alison Takemura. <woohoo> If you like Alison, and want …
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Genomic Mysteries of Giant Bacteria: Insights and Implications
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Behind the Paper: Hot Springs Metagenomics
… Adapting the graduate research experience amidst a global pandemic   …
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BGC Atlas: a web resource for exploring the global chemical diversity encoded in bacterial genomes
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… All of the annotations and data  are publicly available through MycoCosm , the JGI’s web portal for fungal genome … as reliable markers for classifying species and studying diversity in complex biological systems. By making the tools and data available through MycoCosm — a platform widely used across the …
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VirSorter2: a multi-classifier, expert-guided approach to detect diverse DNA and RNA viruses
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Highly diverse and unknown viruses may enhance Antarctic endoliths’ adaptability
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Metagenomic compendium of 189,680 DNA viruses from the human gut microbiome
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
… the area in summer 2016.  She described the microbial diversity patterns of Puerto Nuevo’s coastal waters and … in particular, as a model system for venom-microbe interactions. Cone snail venom has a number of applications, … environment I have consistently experienced each visit through my PhD. This environment makes it easy for someone …
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