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Population genomics of a forest fungus reveals high gene flow and climate adaptation signatures
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Extensions of BLUP Models for Genomic Prediction in Heterogeneous Populations: Application in a Diverse Switchgrass Sample
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… A group led by JGI scientists have made strides in improving and applying a method that allows researchers to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo Yoshikuni and his team  … to rapidly label  E. coli  in order to monitor population dynamics in co-culture. These experiments aim to inform the …
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New and Improved: Eucalyptus Reference is Now Accessible
… An improved genome assembly to support targeted tree … analyses have given the researchers glimpses of the population and pangenome variations in the eucalyptus … Borevitz) conducted by the US Department of Energy Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE Office …
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Axel Visel
… Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy for Science Programs, he focuses on the … Axel Visel is the JGI's Deputy for Science Programs. Click to learn more about our seven science program — their areas of focus, major initiatives and more.  …
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Taking Stock of the Known and Unknown Microbial Space
… Metagenomic datasets could help map out microbial diversity hotspots Over the past few decades, advancements in sequencing technologies have led to an abundance of microbial genomes becoming available to the global research … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User …
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Genome sequencing of evolved aspergilli populations reveals robust genomes, transversions in A. flavus, and sexual aberrancy in non-homologous end-joining mutants
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Fine-scale evaluation of two standard 16S rRNA gene amplicon primer pairs for analysis of total prokaryotes and archaeal nitrifiers in differently managed soils
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Dissecting the dominant hot spring microbial populations based on community-wide sampling at single-cell genomic resolution
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Population genomics provides insights into the genetic basis of adaptive evolution in the mushroom-forming fungus Lentinula edodes
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Genome analyses reveal population structure and a purple stigma color gene candidate in finger millet
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Population structure of an Antarctic aquatic cyanobacterium
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