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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… and DNA Day on April 25. As both Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research … Day on April 25. Since both DNA and the Earth are close to our JGI hearts, we’re featuring some scintillating genomic … across the globe.  Karolina and I kicked off our conversation with a quick recap of how plants, in …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… of the  Marchantia pangenome, scientists developed a resource that associates plant’s genetic variants with specific … scientists want to take a further look into identifying genes related to biotic stresses to better understand … no. 101001675-ORIGINS) and from the FRM/FSER (FRM/FSER202302017064) to P.-M.D., from the CNRS to P.-M.D. and H.P. …
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The Genomes OnLine Database (GOLD) v.5: a metadata management system based on a four level (meta)genome project classification
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First Monoploid Reference Sequence of Sugarcane
… the genes involved in sugar production and for identifying different variants on different chromosomes, … now underway as part of the JGI Community Science Program (CSP), a critical factor in developing sugarcane as a … in sorghum. Based in part on these positive results, in 2017, JGI approved a CSP proposal from the international …
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Crops as Tough as World Cup Turf
… In our warming world, we’ll need corn, sorghum and other crops …
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Analyze Data
… new research questions that span domains. We also work with our partners to build infrastructure in support of new …
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Computationally Classifying Fungal Lifestyles
… methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of concept, … an algorithm that “taught” a computer how to classify 101 representative genomes of Dothideomycetes, the … enabled in part through  JGI’s  Community Science Program (CSP) , as several approved proposals have contributed toward …
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An Integrated Dataset to Understand Ecosystem Interaction
… hope this massive and integrated data set will help identify how different elements of the ecosystem interact and … trees. The data set generated is 25 terabytes in size. Resources for genomic sequencing, analysis and characterization … able to conduct a wide variety of analyses that can enhance our understanding of plant-microbe interactions — with …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… staff, Mouncey explained: “One of the hallmarks of JGI is our diverse workforce and our diverse collaborators around the world. That said, we … updates. Here are a few of the highlights: Mario Banuelos (2017 graduate intern): Assistant Professor of Mathematics at …
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Webinar: SIP technologies at EMSL and JGI
… isotopes to measure carbon and nutrient flux, and identify microbes assimilating labeled compounds. During this … separation to library sequencing and assembly. Like others, our turnaround time has been impacted by the pandemic. 3. Q: … collection. 4. Q: Are there existing narratives, or plans to develop narratives in KBase for SIP studies? I’d be …
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The Physcomitrella patens gene atlas project: large‐scale RNA‐seq based expression data
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What Happens Underground Influences Global Nutrient Cycles
… DOE user facilities EMSL and JGI announce FY 2020 collaborative FICUS projects. Through the Facilities Integrating Collaborations … prominently among the eleven proposals selected with four focused on biofuels and bioproducts. For example, … working to address some of the most pressing challenges of our time. For more information, please visit  …
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