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An Integrated Dataset to Understand Ecosystem Interaction
… hope this massive and integrated data set will help identify how different elements of the ecosystem interact and … trees. The data set generated is 25 terabytes in size. Resources for genomic sequencing, analysis and characterization … able to conduct a wide variety of analyses that can enhance our understanding of plant-microbe interactions — with …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… (Berkeley Lab) through the JGI Community Science Program (CSP) .  Through this collaboration, in 2017, they published the first genome sequence of a … Program makes genomes and multi-omics data from JGI CSP projects publicly available at the PhycoCosm portal . …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… staff, Mouncey explained: “One of the hallmarks of JGI is our diverse workforce and our diverse collaborators around the world. That said, we … updates. Here are a few of the highlights: Mario Banuelos (2017 graduate intern): Assistant Professor of Mathematics at …
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Webinar: SIP technologies at EMSL and JGI
… isotopes to measure carbon and nutrient flux, and identify microbes assimilating labeled compounds. During this … separation to library sequencing and assembly. Like others, our turnaround time has been impacted by the pandemic. 3. Q: … collection. 4. Q: Are there existing narratives, or plans to develop narratives in KBase for SIP studies? I’d be …
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The Physcomitrella patens gene atlas project: large‐scale RNA‐seq based expression data
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Nick Everson
… JGI Operations which include the Safety, Finance, Human Resources, Facilities, IT, Shipping and Receiving, Lab … space and facilities, finance and procurement, human resources, safety, and administrative activities. The Deputy of … infrastructure and business functions. He acts as a resource and provides advice and counsel regarding current DOE, …
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Soil virus offers insight into maintaining microorganisms
… second only to cellulose.  Chitin is also a common food source for microbes living within soil. So, the chitosanase … (IMG/M) data portal. The IMG suite is a community resource for comparative analysis and annotation of all … was enabled in part under the DOE’s collaborative science FICUS initiative, which allows researchers to access …
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JGI Announces 2025 New Investigator Portfolio
… Yaqi You, Yong Zhang and Zhiping Zhong. (All images courtesy of the researchers) Each year, the JGI searches for novel research projects from PIs who have not led any previously accepted proposals.  The New Investigator call , part of our  Community Science Program , allows us to work and share …
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How Maize Makes An Antibiotic Cocktail
… buck. The research team reports that transferring just four genes encoding these enzymes to another plant, such as  … harnessed gene expression data from these lines to identify genes associated with zealexin synthesis. The researchers … Science Program . And the work is part of a  larger CSP Functional Genomics proposal to understand terpene  …
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Chapter Five The Sphagnum Genome Project A New Model for Ecological and Evolutionary Genomics
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The Genomes OnLine Database (GOLD) v.4: status of genomic and metagenomic projects and their associated metadata
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Genomic Encyclopedia of Type Strains, Phase I: The one thousand microbial genomes (KMG-I) project
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