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A Sorghum Pangenome Opens More Doors to Discovery
… resequenced sorghum varieties, a resource for breeders and researchers to harness the traits that let this biomass … around the world, much more genetic diversity exists.  Now, researchers have brought many reference genomes and … “That was one of the most exciting things for me as a computational biologist. We're totally transforming how we …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… Researchers looked across many organisms to see that … leaving potential targets for crop engineering untouched. Research recently published in  The Proceedings of the … both carbon and nitrogen. This research team combined computational and experimental approaches to look at how …
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SPRUCE-ing Up Science
… Merced internship program, Lawrence is now a postdoctoral researcher at the Oak Ridge National Laboratory (ORNL), … Ridge, Tennessee. Recently, Lawrence, in collaboration with researchers from ORNL, Lawrence Berkeley National … According to Lawrence, this summer project aligned with his computational background and interests nicely. And although …
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An Automated Tool for Assessing Virus Data Quality
… CheckV can help researchers assess virus sequence fragments and data … The Science Through advances in sequencing technologies and computational approaches, more and more virus sequences are … uncultivated viruses. Following up on those guidelines, JGI researchers have now developed CheckV (pronounced …
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2022 Progress Report
… seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase … leading integrative genome science user facility enabling researchers to solve the world’s evolving energy and …   Mission  The mission of the JGI is to provide the global research community with access to the most advanced …
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Forming Scientific Connections and Building Community
… JGI brings and being able to be a part of groundbreaking research is very sentimental to me.” Mentors: Crysten … speakers talk about their own experiences and what their research means to them, applying those same principles to my … Cassol, Jeff Froula & Ed Kirton Project: “ Streamlining computational studies of misfolding proteins via high …
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Building Wet and Dry Lab Skills
… students coming to the DOE Joint Genome Institute for research and training experience funded by a DOE training … opportunity to learn all steps including both wet lab and computational analysis. They also learned how to log on to … Greenblum : Hi. My name is Sharon Greenblum. And, I'm a computational biologist. So I have been working with Zyiah …
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Tanja Woyke
… Tübingen (Germany), Dr. Woyke pursued her postdoctoral research at the DOE Joint Genome Institute in 2004. The main object of her research was the symbiont community of a gutless oligochaete … and host-symbiont interplay using metagenomics. Taking on a Research Scientist position in 2007, she switched gears from …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… achievement. To get to this point requires rigorous research, written skill, above all else, determination. … 2018. She selected one of the projects posted by JGI fungal researchers, Igor Grigoriev and Asaf Salamov, and together, … to convert her biological observations into a practical computational application,” said Grigoriev, Wint’s other …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
… with team members previously. I think I may keep doing research, but now I think I can lead a team. So maybe I go to industry field, I lead a research team. I think, yeah, that’s maybe one possibility.  … me, along with other tools that I can use to, um, perform computational biology.  Eric Wu : From the internship I …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… foundational science, creating opportunities for the global research community. The U.S. Department of Energy (DOE) … The JGI strategic plan lays out how users and the global research community will bridge fundamental knowledge gaps to … the opportunities arising from leveraging laboratory and computational technologies at scale, improving connectivity …
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Nikos Kyrpides
… and at Argonne National Laboratory. Dr. Kyrpides’ research focus on Microbiome Research with an emphasis on Microbiome Data Science. His … Thomson Reuters Highly Cited Researcher (Biology & Biochemistry) (2014-2023) Lawrence … Cyber-infrastructure for Advanced Marine Microbial Ecology Research and Analysis ( CAMERA ). …
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