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Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305T), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended
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Effects of Polar Light Cycle on Microbial Food Web
… and offers new clues into a unique environment in the natural world. The Impact From the polar regions to the deep … Antarctica, was separated from the Southern Ocean roughly 5-7,000 years ago and has been well-studied by many …
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Reclassification of the Clostridium clostridioforme and Clostridium sphenoides clades as Enterocloster gen. nov. and Lacrimispora gen. nov., including reclassification of 15 taxa.
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UC Merced Interns Reflect on Their JGI Summer Projects
… — from implementing new data visualization tools, to using natural language processing techniques to categorize genetic … Intern: Lorenzo Scaturchio (undergraduate) Mentor: Benjamin Cole Click the image to watch the video …
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Advantages and Limits of Metagenomic Assembly and Binning of a Giant Virus
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The architecture of resilience: a genome assembly of Myrothamnus flabellifolia sheds light on desiccation tolerance and sex determination
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… from half of the United States. As  reported January 27, 2021 in  Nature , the team led by researchers at the … for the DOE candidate feedstock poplar. “You’re collecting natural diversity and you’re planting natural diversity in … are JGI Flagship Plants. Reaping Long-Term Investment Benefits Switchgrass has a large polyploid genome, which …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… In short, the complexity of nutrients, constraints, etc. of natural environments shape specific genomic signatures that … of Energy Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE Office of Science User Facility, is supported by …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… four strains of anaerobic fungi also, unexpectedly, secrete natural products . Those results showed that these fungi may …
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Jeremy Schmutz
… Mr. Schmutz’s involvement with the JGI dates back to 1997, when he was working for the Stanford Human Genome Center, … al. 2018. The genomic landscape of molecular responses to natural drought stress in Panicum hallii . Nature Communications 9: 5213. Huang, P et al. 2017. Sparse panicle1 is required for inflorescence development …
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An Integrated Dataset to Understand Ecosystem Interaction
… processes for the first time. By collecting data from 27 different poplar ( Populus trichocarpa ) trees, as well as … that contribute to a sustainable bioeconomy. Summary The 27 samples studied by researchers came from two environments: natural forests and plantations managed through human …
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Picking Up Threads of Cotton Genomics
… to other plant genomes. “Globally, cotton is the premier natural fiber crop of the world, a major oilseed crop, and … utilization and increasing the efficacy with which we use natural resources for provisioning society.”   Genome-wide … little confused because they were so genetically similar.” Benefits of High Impact Science “The results described in …
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