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Getting to the Bottom of Fungal Functions Across Earth’s Forests
Across four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new … soil RNA to fungal genomes.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … fungal metatranscriptome yet,” said Igor Grigoriev, Fungal Genomics Program Head at the JGI.  Along with an improved …
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How To Use Our Systems
… … Information on Software Looking for information on our software, including BBTools ? …
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2024 Progress Report
The Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase …
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JGI@25: Studying Sorghum’s Survival Skills
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable … climate has earned it a place on the JGI’s Flagship Plant Genome roster. Sorghum has an important feature in common …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As … what might happen for a stressed typical plant, one that does what’s called C3 metabolism, named for a 3-carbon … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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University of California, Merced Internship Program
Originally conceived as a UC Merced graduate student summer research experience at the JGI, the Genomics Internship Program soon expanded to include …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
Meta-omics datasets show that CRISPR-Cas systems determine mutualism or … interactions are difficult to study in the lab. Metagenomics provides new views of these relationships.  … generated by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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JGI@25: Fueling Investigation into Methane-Making Microbes
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable … has partnered with researchers around the world to map out genomes of rumen microbes. In 2018, through a JGI Community …
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Pinning Down a Piece of Photosynthesis
… are easy to point out. Plants, algae and cyanobacteria create the air we breathe and the fuel for food webs as they … is a research scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … what is now the  Community Science Program Functional Genomics proposal call, the JGI synthesized hundreds of  …
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An Integrated Dataset to Understand Ecosystem Interaction
Research yields a comprehensive tree and soil dataset for understanding the dynamic relationship between … managed through human intervention. By leveraging metagenomics, scientists were able to analyze the DNA of … were provided by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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Supporting community annotation and user collaboration in the integrated microbial genomes (IMG) system
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The JGI announces 2024 awardees for our Community Science Program annual call
Corales, Hugh Cross, Megan DeMarche, Joanne Emerson, Matthew Hudson, Megan Keller and Julia Kelliher; [below] … various important scientific questions relevant to the DOE’s mission, and I look forward to seeing their outcomes.” … calls including our New Investigator and Functional Genomics calls, here on our website . See below for the full …
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