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Community Science Program
… sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  … call is for expansive projects that leverage a range of JGI capabilities, and also requires a Letter of Intent. The … makes the assemblies, gene annotations, and analyses available to the community at large. In most cases where the JGI …
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Marine Microbe Contains Multitudes
… can carry out. The work on single cells was done in collaboration with scientists Tanja Woyke and Rex Malmstrom at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), through the JGI …
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Tracing the Evolution of Shiitake Mushrooms
… raphanica, which has been able to adapt to habitats from Alabama to Brazil, suggesting that the same decay-related … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). … This research …
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Conserved unique peptide patterns (CUPP) online platform 2.0: implementation of +1000 JGI fungal genomes.
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JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom
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How Filamentous Fungi Sense Food
A team led by researchers at the University of California, Berkeley used a multi-omics approach to reconstruct and … sources, these fungi detect which complex chains are available; this information triggers pathways to determine which … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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The Case for Conservation
… each representing a single set of chromosomes, are available. The genome assemblies highlight the multiple advances … to evolve so rapidly in gene content and structure. He and JGI Plant Program head Jeremy Schmutz already see how … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), and at …
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Gene Expression: From On-Off Switch to Dial
… to other systems, expanding the technologies available for other JGI users outside the realm of bioenergy optimization. … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). Researchers …
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Ancient Algae Reveal Secrets of Plant Evolution
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), scientists sequenced the genomes …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… of the earth, but most species do not grow easily in the lab. To access the genomes of uncultured  microbes , … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory, is heavily invested in being …
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Fishing for Novel Cellulose Degraders
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). Using a single-cell screen, they …
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Green Algae Reveal One mRNA Encodes Many Proteins
Sean Gallaher, a research scientist in Sabeeha Merchant’s lab and first author of the article. The research team … included scientists at the University of California (UC), Berkeley, UCLA, UC Davis, Brookhaven National Laboratory, … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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