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Extracting the Secrets of Secondary Metabolites
… CRAGE-CRISPR combo helps further demystify biosynthetic gene … secondary metabolites, those molecules not essential for growth yet essential for survival, may now be easier to … CRISPR provides researchers with a powerful addition to their toolkit to study gene function. As a demonstration, …
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Forming Scientific Connections and Building Community
… 11th cohort of JGI-UC Merced interns pick highlights from their summer experiences. This year the U.S. Department of Energy (DOE) Joint Genome … experiences and what they’ll take with them as they go forward in their careers.   Listed below are the interns, …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… For the last 15 years, Ray Turner has been one constant for the Joint Genome … such an awesome Ops Team over the years that have fun doing their job, but also take great pride in delivering the best … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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A Natural Mechanism Can Turbocharge Viral Evolution
… Understanding how a fundamental mechanism of evolution allows … dance between a virus and microbial cell is an embrace. For a virus with a “head-tail” morphology, this means using … ago, a team discovered a group of viruses that had in their genomes a surprising tool: a “diversity generating …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… In April 2020, we mark both the 50th celebration of Earth Day … relevant to living on a changing planet. Transcript for Audio Two special days occur in April: the 50th … of a JGI-supported project studying the world’s rivers and their microbial communities. He’s focusing on the Arkansas …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… Trained on environmental data, a new JGI tool more accurately … available data, GenomeOcean employs artificial intelligence for cutting-edge genomic research — and is capable of … to explore whether we can leverage this model to help their research projects.”  There is still trouble-shooting …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … energy and environmental challenges.   Scanning the California oak woodlands from the air, large swaths of the … to an all-time high. California homeowners witnessed how their once stout oaks, the anchors of their properties , …
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Disclaimer
… NOTICE Information from this server resides on a computer system funded by the U.S. Department of Energy. Anyone using this system consents to … With respect to documents available from this server, neither the United States Government nor the University of California nor any of their employees, makes any warranty, …
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The Expanding Universe of Methane Metabolisms in Archaea
… Metagenome-assembled archaeal genomes provide new insights into … of the Earth’s atmosphere and regulating the global climate for life to flourish. For Guillaume Borrel and Simonetta … is published in the same issue of Nature Microbiology . Their study focuses on the discovery of new populations …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… As SIP experiments shed more light on microbial communities than ever before — especially with the prospect of meta-analyses boosted … set up a broad experiment to compare results between labs. Their labs, as well as Pett-Ridge’s group, will assemble … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Uncovering Novel Genomes from Earth’s Microbiomes
… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple applications. … microbes cannot be cultivated under laboratory conditions, their genomes can’t be sequenced using traditional … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Four principles to establish a universal virus taxonomy
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