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Microbiome Data Science Team
… Biology is currently experiencing a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent … of thousands of archaeal and bacterial type strains ( GEBA-type strains project ), the delineation of host-virus …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… over the last  25-plus years since the JGI’s inception, making it possible for researchers to get a close look … For example, with support from the  Exascale Computing Project , the JGI — along with the National Energy Research … through the Community Science Program, it was the largest project the JGI had ever put together.  “When we proposed to …
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Massie S. Ballon
… Massie S. Ballon is the Communications and Outreach Manager at the JGI. Through multi-platform … of and access to JGI public resources and the DOE mission, as well as help cultivate the next generation of genomic … Massie Ballon is the JGI's Communications and Outreach Manager. Click …
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Scaling Up Existing Skill Sets
… opportunities in fields ranging from plant-microbe interactions to functional genomics. Hear from five of the Summer … internship with the JGI had on your plans to pursue a STEM career?
 Doing the JGI internship has given me a great … anyone in the Institute to get feedback and insights on the project and everyone’s willingness to guide or mentor me …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… Program was brimming with excitement and determination as they came onsite. From data carpentry to science … and their JGI mentors are listed below, along with their project focus areas: Undergraduate Interns Andrew Lin and … on predicting the level of photosynthesis in a model green alga called Chlamydomonas reinhardtii. We’re using an …
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User Programs
… Call FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics JGI-TMF Critical Minerals and Materials Status … CLOSED Who Should Apply? Investigators with research projects that integrate the expertise and capabilities of … user facilities Investigators with DOE mission-relevant projects that call for expansive sequencing, synthetic …
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Building Sphagnum Genomic Resources
… Sphagnome data would enable researchers’ insights on their potential carbon cycling impact.   The Science Enabled by the JGI’s … (Spruce and Peatland Responses Under Changing Environments) project, assessing how northern peatland ecosystems respond … under Contract No. DE-AC02-05CH11231. For the sphagnome project, germplasm establishment and maintenance is …
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Tracing the Evolution of Shiitake Mushrooms
… genus Lentinula, which have evolved to decompose hardwoods on every continent besides Europe and Antarctica. A  new analysis … Additionally, these fungi play a role in the global  carbon cycle . As decayers, Lentinula fungi access carbon … award 0000238431 to D.H., the GENOBIOREF (BIO2017-86559-R) project of the Spanish Ministry of Science and Innovation …
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Marine Microbe Contains Multitudes
… A deep dive into microbial genomics reveals one bacterial species is made of four ecologically distinct … of living. The Impact Microbes help regulate the global carbon cycle — fixing, transforming, and respiring carbon. … out that, without the JGI, the discoveries made in this project wouldn’t have been possible. Scientists hadn’t known …
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An amoeba and a cyanobacterium walk into a bar...
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Who We Are
… of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at Lawrence Berkeley National Laboratory. The JGI consists of 225 researchers and … organizations such as the DOE Systems Biology Knowledgebase and the National Microbiome Data Collective.    …
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Science Programs
… their expertise to enhance the scientific impact of user projects, develop cutting-edge approaches for and with users, and create computational tools and resources for them. Their concerted efforts help maximize the JGI’s impact in advancing …
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