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JGI@25: The Little Alga That Could
… In honor of the JGI's 25th anniversary in 2022, we have … of those shared by both humans and flowering plants). Its genome also contains hundreds of genes uniquely associated … and published in the journal Science . At the time, the project was co-led by Daniel Rokhsar, head of the JGI’s …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… at the University of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology (HudsonAlpha), and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … This means it contains more than two copies of the genome , which can have pronounced ecological and …
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Tour the IGB
… Take a virtual tour of the IGB, home of the DOE Joint Genome Institute. To navigate virtual tours of each floor, … out. 1st floor 2nd floor 3rd and 4th Floors The JGI mural on the 3rd floor whimsically references dozens of iconic JGI contributions to advancing the frontiers of …
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JGI@25: From Life at the Extremes to Editing Genomes
… In honor of the JGI's 25th anniversary in 2022, we have … is a pioneer in metagenomic studies, recovering microbial genomes from biofilm samples at the Richmond Mine in Iron … and metabolism through reconstruction of microbial genomes from the environment . Nature. 2004. 428, 37–43 …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… In the summer of 2015, Adam Session was a postdoc working at the DOE Joint Genome Institute with Dan Rokhsar, who also holds a joint … specific procedure.” The rapport they built during this project and others (including the dissertation that preceded …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… More than 20 UC Merced students have contributed to the research of 13 JGI scientists since the … shared their thoughts on the students’ efforts. Ben Cole, a project scientist in Visel’s Genomics of Plant-Microbial … Responses Under Climatic and Environmental Change (SPRUCE) project Melanie LeGro (2016 graduate intern): Currently …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… enabled by the JGI DNA Synthesis Science Program. Fashioning DNA outside a cell is key to interrogating what genes … This is where the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … in five years, have come out of the JGI-supported project. “The JGI DNA Synthesis Science Program has been …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… 5,000 times bigger than most bacteria. To put it into context, it would be like a human encountering another human … appointments at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … keeps its DNA more organized. “The big surprise of the project was to realize that these genome copies that are …
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Micro-Scale Applications Group
… The Micro-Scale Applications group explores the genetic makeup of natural microbial … technology in order to enhance the quality of single-cell genomes and directly link functional information with individual cells. Research Team    … internal analytical standards to accurately measure environmental microbiome activity levels.This functional assay …
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JGI announces 2023 CSP Functional Genomics awardees
… year, the JGI accepts proposals for state-of-the-art functional genomics research from potential users who need help … Through our CSP Functional Genomics call , we look for projects that will leverage the JGI’s DNA synthesis and omics capabilities to enhance understanding of gene and genome function.  Below find a list of the six researchers …
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
… in 2011, JGI-supported researchers published a paper in the journal Science . It detailed how they’d used metagenomics … State University campuses for biotechnology education as part of a course-based undergraduate resource … Hess, also the chair of the JGI User Executive Committee, on how that study went from the lab to the classroom. …
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Microbial Genomics & Metagenomics (MGM) Workshop
… Registration has closed.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is offering a five-day workshop on … designed to familiarize users with the Integrated Microbial Genomes & Microbiomes (IMG/M) data and workflows for …
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