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Making a Lichen Together
… and alga to understand their partnership more clearly. The Science The humble lichen is a superorganism: one being that is actually comprised of two (or more) … For the first time, a team has analyzed in parallel the genomes and transcriptomes of both partners to better …
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JGI Launches Latest Strategic Plan
For the Joint Genome Institute, the end of 2018 was marked by a celebration of contributing over one “petabase” – a quadrillion … — A Vision for Integrative and Collaborative Genome Science , the culmination of an eight-month intensive …
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Jeremy Schmutz
Mr. Schmutz’s involvement with the DOE Joint Genome Institute dates back to 1997, when he was working for the Stanford Human Genome Center, now the HudsonAlpha Institute for Biotechnology. There he constructed … 5, 16, and 19. Following the completion of the human genome project in 2003, he developed sequencing, assembly, and …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… 5,000 times bigger than most bacteria. To put it into context, it would be like a human encountering another human … appointments at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … keeps its DNA more organized. “The big surprise of the project was to realize that these genome copies that are …
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Enlarging Windows into Understanding Gene Functions
JGI innovates protocol revealing how genetic variations in sequences affect traits. In a text file, the rows of … four letters represents an organism’s genetic code, or genome, which underlies physical features and functions. … Program (CSP) focuses on a fungal comparative ENCODE project known as FUNCODE. “We noticed a few years ago that …
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A Grass Model to Help Improve Giant Miscanthus
… insights into benefits of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass  … chromosomes of  Miscanthus arose by ancient hybridization (polyploidy) and insights into the dynamics of gene …
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Scientific Advisory Committee
The Scientific Advisory Committee (SAC) is a board convened by the JGI Director to provide a scientific and … programs at the JGI; and overview of the Community Science Program (CSP). A crucial job of the committee is to … from the CSP Proposal Study Panel on prioritization of CSP projects and, with concurrence from the DOE Office of …
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Len Pennacchio
In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and has focused on applying state-of-the-art molecular methods to address … a vision for future technical JGI directions for DOE User science. … Complete Publications Genomic Technologies …
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place where you can …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
In a recent  Nature Genetics paper , researchers focused on the full composition of genes, or pangenome, of the model plant  Marchantia polymorpha. Commonly … plant lineages in the  Open Green Genomes Initiative , a project supported by the U.S. Department of Energy (DOE) …
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Jane Grimwood Named HudsonAlpha Genomics Chair
Congratulations to Jane Grimwood, who has been appointed the … City. Grimwood is also co-director of the HudsonAlpha Genome Sequencing Center. Grimwood heads the Library … after the JGI was established to work on the Human Genome Project in 1997. She was a group lead at Stanford Human …
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What Happens Underground Influences Global Nutrient Cycles
EMSL and JGI announce FY 2020 collaborative FICUS projects. Through the Facilities Integrating Collaborations for User Science (FICUS) program, two Department of … Molecular Sciences Laboratory (EMSL) and the  DOE Joint Genome Institute (JGI)—have selected 11 proposals for …
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