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A Standardized Synthetic Eucalyptus Transcription Factor and Promoter Panel for Re-engineering Secondary Cell Wall Regulation in Biomass and Bioenergy Crops
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Transcriptional response of the white-rot fungus Dichomitus squalens to polysaccharides reveals a co-expression network of plant biomass conversion related genes
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A Customizable Approach for the Enzymatic Production and Purification of Diterpenoid Natural Products.
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Partnerships: Myco-Ed
The Mycological Curriculum for Education and Discovery  (Myco-Ed) is a Course-Based … techniques and data analyses compile original data for improving fungal genomic resources empower students … exercises … Beyond providing a scalable solution for production of high-quality fungal reference genomes, this …
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Enhancers in Plant Development, Adaptation and Evolution
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Genomic characterization of three marine fungi, including Emericellopsis atlantica sp. nov. with signatures of a generalist lifestyle and marine biomass degradation
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Strain Engineering
… a taxonomically diverse suite of microbial chassis strains for elevated opportunity for expression. Research Team    … For further details, please reach out to the Group Lead …
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The More the Merrier: Making the Case for Plant Pan-genomes
Laboratory (Berkeley Lab), relied on a model grass system for answers. Their work  recently appeared in  Nature … B. distachyon , a relative of the candidate bioenergy crop switchgrass and a JGI Flagship Plant. All three  … small genomes, short life cycles and can be easily transformed, traits that make them easy to work with …
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Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… involved? How long does it take to do all the analyses? A:  For the JGI  New Investigator and  Functional Genomics … cell counts or biovolume? A: We typically use a measure of biomass, e.g. wet weight, total carbon analysis of the … samples and test how many they thought would be necessary. Switchgrass has an enormous metabolome, and we wanted to …
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Computationally Classifying Fungal Lifestyles
… known to infect most major food crops and feedstocks for biomass and biofuel production. Learning about the ecology and evolution of  …
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Synthetic Biology Informatics Group
Software engineers in the Synthetic Biology Informatics Group develop, deploy, and maintain software that … which provides a suite of tools to automate sequence design for assembly by Gibson, Yeast recombination and Golden Gate … as provide process automation support Research Team    … For further details, please reach out to the Group Lead …
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