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… episode, host Menaka Wilhelm interviews researchers — JGI Users — and dives into their work on all kinds of organisms, … and fungi to microbes and viruses. Listen in to explore the data that illuminates biology, and hear how it could power …

… at the DOE Joint Genome Institute, a DOE Office of Science User Facility, revealed the largest number of TPS genes of … from a biofuels production perspective. By using genomic database alignment tools, researchers searched for TPS genes in C. citriodora . … Training Program Scholarship. Sequencing and assembly data carried out by EMBRAPA as part of the  Corymbia  genome …

… analysis and interpretation of genomic and metagenomic data for JGI’s user community. She also provides support for user science … through implementation of advanced analysis pipelines and tools as well as development and implementation of …

… worked on ranged far and wide — from implementing new data visualization tools, to using natural language processing techniques to … a fruitful experience for mentors and students alike. Tools like Slack, Google Docs, and GitHub enabled virtual …

… reactions. For this article alone, more than 600 genomes (dubbed “GEBA-Actino”) were sequenced from DSMZ type-strain deposits. All of these genome sequences and the tools to compare them are available on the JGI’s Integrated … gene loss shape the BGC repertoire in most genomes. The BGC data will also soon be contained within the JGI’s Secondary …

… other related organisms, requires using more specialized tools, skills and protocols,” explained Hiroshi Otani, an … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, as well as a member of  its Secondary … user-available API’s offer a space to not just store data, but for the community to discuss those data and make …

… The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to the core set of … gene clusters (BGCs.) As reported in the recent Database issue of the journal Nucleic Acids Research , … using multiple commonly used sequence analysis tools is a means of expediting BGC and biosynthesis …