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Characterization of digestate microbial community structure following thermophilic anaerobic digestion with varying levels of green and food wastes
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How to Target a Microbial Needle within a Community Haystack
A workflow for capturing the genetic make-up of specific … tested and deployed a pipeline to first target cells from communities of uncultivated microbes, and then efficiently … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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How Filamentous Fungi Sense Food
Tracing gene regulatory networks in the model fungus  Neurospora crassa . The Science A … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … a Joint Genome Institute Community Science Program grant (CSP 982), and funds from the Fred E. Dickinson Chair of Wood …
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Effects of Polar Light Cycle on Microbial Food Web
Populations of Antarctic lake microbial communities change with the seasons. The Science Light-harvesting bacteria … Ace Lake were collected over a 10-year period and sent to JGI for metagenomic sequencing. A study  recently published …
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Fungus Fuels Tree Growth
Researchers start pinning down how a fungal symbiont spurs growth of poplar, a potential … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, through its  … 01 to F. Martin), JGI Community sequencing program project (CSP570, DE-AC02-05CH11231), and National Science Foundation …
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Characterization of Streptomyces nymphaeiformis sp. nov., and its taxonomic relatedness to other polyhydroxybutyrate-degrading streptomycetes.
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New Research Sheds Light on Diversity in the Deep Sea
Microbial communities living near hydrothermal deep-sea vents hold … openings in the Earth’s crust that emit hot, mineral-rich water. These vents are too deep in the sea to get any … the communities studied. The datasets are available on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) …
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An Integrated Dataset to Understand Ecosystem Interaction
… soil dataset for understanding the dynamic relationship between poplar trees and their microbial partners. The Science … molecules produced by the trees and associated microbial communities. This revealed key metabolic pathways and … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Eelgrass Proves to Be Much Younger Than We Thought
Recent study shows eelgrass has been around about 2.5 million years less … originated in Japan before spreading around the globe. Now, scientists have shed light on both when and how eelgrass … Energy Joint Genome Institute Community Sequencing Program (CSP 502951, 2016, Population and evolutionary genomics of …
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A Natural Mechanism Can Turbocharge Viral Evolution
… the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility located at … over what was previously known, throws open the doors to characterizing how DGRs work at the molecular level. … DE-AC02-05CH11231 through the Community Science Program (CSP), the G. Unger Vetlesen and Ambrose Monell Foundations, …
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IMG Group
The IMG group owns and maintains integral components of JGI’s production … speciation events within existing species. Within the JGI’s production pipeline, ANI is used to ascertain the …
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FICUS Overview
Collaborations for User Science (FICUS) initiative was established in 2014 to encourage and enable researchers … be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. … All data is made publicly available in accordance with  JGI’s Data Policy . In cases where the JGI provides …
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