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Fungus Fuels Tree Growth
… matter, or as an endophyte, living between a plant’s root cells. The fungus is almost always found among and … fine-tune their engineering efforts of both plants and root microbiomes to grow energy crops more efficiently. Summary … of Florida collected forest samples of poplar and soil from Washington and Oregon. The cuttings included genotypes …
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2024 Progress Report
… home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab … ” — as articulated in our new Strategic Plan , which was released in April 2024 — through serving an increased number …
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JGI@25: From Life at the Extremes to Editing Genomes
… challenges. Congratulations to Jennifer Doudna of the University of California (UC), Berkeley and Lawrence … For the past few years they have partnered with JGI’s Microbiome Data Science group led by Nikos Kyrpides , mining … collection of publicly accessible metagenomic datasets from a wide variety of ecosystems around the world, …
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The Arabidopsis lyrata genome sequence and the basis of rapid genome size change
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1001 Proteomes: a functional proteomics portal for the analysis of Arabidopsis thaliana accessions
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The Peach v2.0 release: high-resolution linkage mapping and deep resequencing improve chromosome-scale assembly and contiguity
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Intrinsic and Extrinsic Programming of Product Chain Length and Release Mode in Fungal Collaborating Iterative Polyketide Synthases
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Complete Genome Sequence of Agrobacterium sp. Strain 33MFTa1.1, Isolated from Thlaspi arvense Roots
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Sequencing Submission Requirements for DNA Synthesis
… be emailed to  Miranda Harmon-Smith, Synthetic Biology Project Manager . … add the characters “.gb” (no quotes, just .gb) to the end of your file name. …
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Nikos Kyrpides
… 2004 to lead the Genome Biology Program and the development of the comparative analysis platforms for microbial genomes … IL. He did his postdoctoral studies with Carl Woese at the University of Illinois at Urbana-Champaign and at Argonne … National Laboratory. Dr. Kyrpides’ research focus on Microbiome Research with an emphasis on Microbiome Data …
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… Systematics for the triennium 2017-2020! Established by the University of Queensland in 1986, the van Niel Prize recognizes …
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Training the Next Generation of Talent
… fellow Ben Cole on a project involving bacteria in Arabidopsis plant roots. At the same time, Lawrence worked with Nicole Johnson … on the genetic mechanisms of chemotaxis in the Arabidopsis microbiome, particularly, how bacteria can be driven toward …
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