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Refining the Process of Identifying Algae Biotechnology Candidates
… ] The Science The recipe for growing algae as a source of sustainable biofuels seems fairly simple: place these algae … feedstocks that can thrive in saltwater mitigates concerns about diverting resources such as arable land and fresh … capacity to produce enough algal biomass to yield the equivalent of 10-27 billion gasoline gallons if target yields …
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How to Target a Microbial Needle within a Community Haystack
… the microbial world through bulk community sequencing (metagenomics) and single-cell genomics, the vast majority of … targeted genomic approach would allow researchers to focus on specific microbes within metagenome samples and … traditional shotgun metagenomics approach to learning more about environmental samples starts with researchers first …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… has released its newest 5-Year Strategic Plan: Innovating Genomics to Serve the Changing Planet (download a copy at … .) This plan aligns the DOE Office of Science user facility with broader national efforts to promote and … support of our goals,” said Mouncey. “Creating transparency about our efforts is critical for enabling complementary and …
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Zhong Wang
Research in the Analysis R&D group focuses on developing new bioinformatics solutions to support JGI in adopting new genomics technologies, scaling up genomics analysis to peta-bases, …
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The Case for Conservation
… crop yields.  The Science The fire moss Ceratodon purpureus is a short plant with a complex genome . Now, … assemblies highlight the multiple advances in sequencing technologies applied to the effort. The Impact Found on all … HudsonAlpha. As the team discussed in a JGI podcast episode about the work, the effort to fully sequence the fire moss …
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Tanja Woyke
… which she deciphered function and host-symbiont interplay using metagenomics. Taking on a Research Scientist position in 2007, … as well as our Deputy of User Programs. Click to learn more about the program's areas of focus, major initiatives and …
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Making a Lichen Together
… time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership more clearly. … comprised of two (or more) participants. One is a fungus (usually belonging to the ascomycetes, one of the two … in the lichen lifestyle. The team’s results appear in  BMC Genomics . To explore the genomes, Armaleo and colleagues …
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Decoding Yellowstone’s Microbial Mats
Along the way, they’ve encountered surprises, adopted new technologies, and made a few discoveries about the microbial mat denizens.  …
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DOE Metrics
… hours.   FY 2024 DOE Metrics There were 2,456 unique* JGI users in FY2024 , which includes Principal Investigators (PIs), Co-PIs, and collaborators. *Unique users are counted once, even though an individual may have … new computational developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – …
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Homologous Recombination and Transposon Propagation Shape the Population Structure of an Organism from the Deep Subsurface with Minimal Metabolism
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Microbial community transcriptomes reveal microbes and metabolic pathways associated with dissolved organic matter turnover in the sea
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Photochemical alteration of organic carbon draining permafrost soils shifts microbial metabolic pathways and stimulates respiration
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