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Frequently Asked Questions: Proposal Submission
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Single Cell Research Group
… through global metagenomics.” Nature 578(7795): 432-436 (2020). Seshadri R., Leahy S. C., Attwood G. T., Teh … of microbial single-cell sequencing. Nat Methods 14(11): 1045-1054 (2017). Schulz F., Yutin N., Ivanova N. N., Ortega … (MIMAG) of bacteria and archaea. Nat Biotechnol 35(8): 725-731 (2017). Woyke T . & Rubin E.M. Evolution. Searching for …
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… production. Also notable, researchers found it is missing 33 genes thought essential for photosynthesis, yet still … The discovery that Auxenochlorella thrives despite lacking 33 conserved photosynthesis genes suggests remarkable … and Environmental Research program under award no. DE-SC0023027 (to SSM and JLM) with support from the Gordon and Betty …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… thioesterases, we were actually able to find approximately 300 with NRPSs nearby. And of those once we did the … about 140 unique cyclic peptides. And from that, about 130 of them were not previously known. DAN: Very cool. …
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Novel heavy metal resistance gene clusters are present in the genome of Cupriavidus neocaledonicus STM 6070, a new species of Mimosa pudica microsymbiont isolated from heavy-metal-rich mining site soil
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Hiroshi Otani
… bacterial RiPP biosyntheses. J Ind Microbiol Biotechnol. 2023 Feb 17;50(1):kuad005. Otani H, Udwary DW, Mouncey NJ. … of transcriptional machineries. Nat Commun. 2022 Jun 17;13(1):3502. Udwary DW, Otani H, Mouncey NJ. New keys to unlock the …
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VEGA Symposium
… September 19, 2026) General & Berkeley Lab Attendee – $300 Students & Postdocs – $250   Hosted by the DOE Joint …
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Complete genome sequence of the thermophilic, hydrogen-oxidizing Bacillus tusciae type strain (T2T) and reclassification in the new genus, Kyrpidia gen. nov. as Kyrpidia tusciae comb. nov. and emendation of the family Alicyclobacillaceae da Costa and
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An Integrated Dataset to Understand Ecosystem Interaction
… Laboratory (Berkeley Lab). All of this information — 318 metagenomes, 98 plant transcriptomes and 314 metabolomic profiles — combined offers the global … DE-AC05-00OR22725. The work ( https://doi.org/10.46936/10.25585/60000017 ) conducted by the U.S. Department of …
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Webinar: MycoCosm Tutorial
… the potential to create new EcoGroups – reach out to us. 3.  Q: Can you use NCBI taxonomy information to search your … up for 1000 fungal genomes. Nucleic Acids Res. 42(1):D699-704 describes the pipeline and portal. Some parameters used … FilteredModels track you may want to search AllModels too. 31.  Is there a way to track the JGI ID changes as genomes …
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Frequently Asked Questions: Project Management
… sites: Microbes: IMG (citation: https://doi.org/10.1093/nar/gkaa939 ) Metagenomes and Single Cells: IMG/M   (citation: https://doi.org/10.1093/nar/gkaa939 Fungi: Mycocosm (citation: …
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Nigel Mouncey
… for Industrial Microbiology and Biotechnology in 2022-2023.   Commentary … Society for Industrial Microbiology and Biotechnology (2023) Charles Porter Award, Society for Industrial Microbiology … vitamin C production. (2012) U.S. Patent Application US8318462 Fermentation process. (2008) U.S. Patent Application …
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