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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… The Sequence to Function: Applications and Analysis for the Future (SFA²F) meeting brings … and informal networking events. JGI will present both a genome center talk and a tech talk. Stop by the JGI booth to …
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A Step Toward Controlling Soybean Rust
… Rust (ASR) and is the major pathogen of soybean. Left uncontrolled, soybean rust could reduce crop yields by as much as 90 percent. As part of the DOE Joint Genome Institute’s  2016 Community Science Program portfolio … Research (INRA)  proposed sequencing a reference genome for  P. pachyrhizi to develop better strategies to …
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Extracting the Secrets of Secondary Metabolites
… biosynthetic gene clusters.  The Science Microbial secondary metabolites, those molecules not essential for growth … Repeats) is the leading tool for accurately editing genomes, its effectiveness has historically been limited due to the lack of robust tools available …
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DOE Metrics
… FY 2026 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal  Actual Total*   Actual % of Goal … counted once, even though an individual may have several projects/roles. Sequencing Quarter Total Bases (Trillions) … developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – Report on progress …
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New Research Sheds Light on Diversity in the Deep Sea
… array of microorganisms adapted to living in extreme conditions. At these vents, and underwater volcanoes,  … these vents survive in very hot, high-pressure and chemically-rich ecosystems. This means they hold clues for … Scientists with the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at …
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… Newly developed chemiluminescent biosensors shed light on how bacteria function and colonize diverse environments. … di-GMP levels in environmental samples or clinical isolates. As cyclic di-GMP also regulates enzymes … at the University of California, Berkeley and the Joint Genome Institute, a DOE Office of Science User Facility, …
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PhycoCosm Tutorial
… Learn more about PhycoCosm, the largest interactive collection of sequenced algal genomes, omics data and comparative analysis tools developed … Berkeley Lab. Presented by Igor Grigoriev, Alan Kuo, Sara Calhoun and Richard Hayes. …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… A two-day kick-off meeting held at Lawrence Berkeley National Laboratory (Berkeley Lab) marked the visit of an … Research Center One Health Ruhr (OHR), and the DOE Joint Genome Institute (JGI), Molecular Biophysics and Integrated … the Advanced Light Source, future collaborative research projects were also intensively discussed. The Berkeley …
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JGI Announces 2025 New Investigator Portfolio
… Flavia Winck Vischi, Jennifer Wisecaver, Yaqi You, Yong Zhang and Zhiping Zhong. (All images courtesy of the … researchers) Each year, the JGI searches for novel research projects from PIs who have not led any previously accepted proposals.  The New Investigator call , part of our  Community Science Program , allows us to …
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Inaugural Critical Minerals & Materials Joint Research Portfolio Announced
… Sun, Olena Vatamaniuk, Setsuko Wakao, Meng Wang, and Allison Werner.   A total of 20 proposals were selected by the Joint Genome Institute (JGI) and the Molecular Foundry (TMF) for … of research proposals integrates genomics with nanoscale science, all aimed at accelerating discoveries and …
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Gene Expression: From On-Off Switch to Dial
… Fine-tuning metabolic gene expression helps identify variants in yeast genes. The Science … researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … glycerol and galactose. Although they are historically well-studied, Alper’s team discovered new gene targets …
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Accelerating Metagenomics Discoveries with Deep Learning
… On July 6, scientists from Lawrence Berkeley National … how researchers are utilizing deep learning to automatically generate insights from metagenomic data. In deep … biologist at the US Department of Energy (DOE) Joint Genome Institute (JGI), presented on generating vector …
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