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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist … Society for Microbiology (ASM). Roux leads the Viral Genomics group within the JGI Metagenome Program, and … Roux is also one of the lead organizers of the Viral EcoGenomics & Applications (VEGA) Symposium , which will take …
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JGI Early Career Researchers Featured in mSystems Special Issue
… In a special issue of mSystems , out May 14, 2019, JGI researchers are among … beyond the tried-and-true method of traditional shotgun metagenomics. One approach uses fluorescence-activated cell … Simon Roux, a member of Eloe-Fadrosh’s Environmental Genomics group, makes a pitch for readers to get involved in …
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Introducing New Members of the JGI User Executive Committee
… serving on the UEC – go here to view the full roster of members. Each of the researchers had their own reasons for wishing to … review procedures and the organization of the JGI Annual Genomics of Energy & Meeting. Any investigator who has been …
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Gut Fungi: Unexpected Source of Novel Chemicals
… The Science Anaerobic fungi, which die in the presence of oxygen, dwell in herbivore guts and help them digest … meal. In their evolutionary history, these fungi branched off early from aerobic fungi, which can breathe oxygen — just like we do. Oxygen is a rich source of energy, and because anaerobic fungi can’t harness it, …
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JGI Hosts GPU Hackathon in May
… Computing Facility (OLCF), NVIDIA, and the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, aims to explore … “JGI is one of the largest producers of environmental genomics data and has a strong reputation in the community,” …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… In the summer of 2015, Adam Session was a postdoc working at the DOE Joint … who also holds a joint appointment with the University of California, Berkeley. Nowadays, Session is an Assistant Professor at Binghamton University in New York. He and Rokhsar …
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You Can Move, But You Can’t Hide
… to replicate themselves and spread from cell to cell. Two of the most common forms of MGEs are viruses and plasmids. They can be found in … cycles around them. By understanding more about the genomics of MGEs and their evolution at the cellular level, … DE-AC02-05CH11231. This work also received support from the Genomic Science Program in the U.S. Department of Energy, …
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Introducing New Members of the JGI User Executive Committee
… JGI User Executive Committee (UEC) : Roland Hatzenpichler of Montana State University, Teresa Pawlowska of Cornell University, and Jana U’Ren (pronounced … review procedures and the organization of the JGI Annual Genomics of Energy & Meeting. Any investigator who has been …
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Training the Next Generation of Talent
… DOE JGI, UC Merced Days after presenting the results of his summer research at the U.S. Department of Energy … in the DOE JGI/University of California, Merced Genomics Distinguished Graduate Internship Program. … UC Merced has many talented graduate students working in genomics and neighboring areas, areas the JGI is interested …
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A Natural Mechanism Can Turbocharge Viral Evolution
… Understanding how a fundamental mechanism of evolution allows microbes to adapt to changing … cell’s membrane. Two decades ago, a team discovered a group of viruses that had in their genomes a surprising tool: a … who led the research team and is the head of the Viral Genomics group at the JGI, thinks that if you’re a virus or …
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Alabama A&M Interns Access An Abundance of Knowledge
… mentors Yi Zhai and John Vogel on researching the effects of Brachypodium distachyon plant root exudates on the plant … is Dr. Yi Zhai, and I’m currently working on the effect of plant root exudates in the rhizosphere and microbiome. … experience in molecular biology and plant functional genomics, because this work is essential for improving crop …
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JGI on the 2021 Highly Cited Researchers List
… in their chosen field or fields through the publication of multiple highly cited papers during the last decade.” … past year, through programs including the JGI-UC Merced Genomics Internship Program and the DOE Office of Science … in the samples. Simon Roux co-organized the Viral EcoGenomics & Applications (VEGA) Symposium series. The online …
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