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When “The Blob” Made It Hotter Under the Water
… impact on marine microbial communities. The Science A team of researchers tracked the impact of a large-scale heatwave … were sequenced by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Research (SCOR), the US Department of Energy (DOE) Joint Genome Institute, an Office of Science User Facility, …
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Partnering with CalTeach – Training the Next Generation STEM Workforce
Basepairs, A Vision for Integrative and  Collaborative Genome Science” – through early introduction to the … to further develop a more diverse and inclusive pool of talent for career opportunities at JGI and Berkeley Lab. …
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Trent Northen
Northen’s research is focused on using metabolomics to link genomes with environments to understand how webs of microbes cycle carbon and sustain biomes via the … … Metabolomics Science Program … Education … Selected Publications … Awards and Honors …
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What Happens Underground Influences Global Nutrient Cycles
… for User Science (FICUS) program, two Department of Energy (DOE) Office of Science national user … Molecular Sciences Laboratory (EMSL) and the  DOE Joint Genome Institute (JGI)—have selected 11 proposals for … alga  Chlamydomonas reinhardtii , one of the JGI’s Flagship genomes. She and her colleagues have generated a …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… ice in the Arctic has decreased by more than 30% in terms of quantity and thickness. Replacing older, thicker ice with … sequencing from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … changing salinity of the environment. ( The annotated algal genome is available on the JGI’s PhycoCosm data portal.) …
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JGI-UC Merced Interns Share Their 2021 Experiences
During the summer of 2021, 13 interns from UC Merced spent eight weeks working … Evaluation of Binning Tools for Microbial Eukaryotes in Metagenomes … Functional exploration of Phage Impact on … Lineage Specific Conserved Genes in Giant Viruses … Pan-genome Graphs: Approaches for Complete Categorization of …
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JGI User Executive Committee Expands
… have been elected to the User Executive Committee (UEC) of the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User … different environments. He’s been involved in several plant genome projects through the Community Science Program. As a …
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From Textbook to Real World Applications
When local students Maya Hanck of Carondelet High School and Tim Kostolansky of De La Salle High School expressed an interest in learning more about the principles of synthetic biology, Robert Evans and Jan-Fang Cheng in the …
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Chomping Toward Better Plastic Recycling
We know all kinds of things about plastic – except, how to break it down for …
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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
This is the third and final episode of our series on a giant metagenome assembly from Wisconsin’s Lake Mendota. In the last two episodes, we’ve covered the specialized software and supercomputers behind this project. But every …
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Susannah Tringe Named 2020 DOE Lawrence Award Recipient
Congratulations to Susannah Tringe , one of eight scientists and engineers who received the 2020 Ernest Orlando Lawrence Award , one of DOE’s highest honors! Tringe, a microbiologist, was recognized for “advances in sequence-based studies of microbial assemblies, revealing the roles of microbial …
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Busting the Unbreakable Lignin
New evidence shows anaerobic fungi can degrade the hardiest of plant components   The Science There are three main … with researchers at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … RNA sequencing and alignment to the reference fungal  genome . The study’s pivotal NMR (nuclear magnetic …
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