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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… JGI-led team significantly expands the global diversity of large and giant viruses. While the microbes in a single … belong to the nucleocytoplasmic large DNA viruses (NCLDV) supergroup. The expansion of the diversity for large and … co-cultivated with amoeba or with their hosts, though metagenomics is now making it possible to seek out and …
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JGI Earth Month: Kjiersten Fagnan Reflects on Shelter-in-Place Effects
… In   April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25.  On March … at Lawrence Berkeley National Laboratory, is located in one of those counties. The shelter-in-place order has since been … In this brief captioned video, JGI Chief Informatics Officer Kjiersten Fagnan reflects on the personal and …
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Accelerating Metagenomics Discoveries with Deep Learning
… insights from metagenomic data. In deep learning, a branch of machine learning, data is passed through algorithms … into multiple interconnected layers. The architecture of these algorithms, inspired by communication networks … protein sequences. Sevim is part of the JGI Genome R&D Group and is one of more than 100 scientists and systems …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
… Tips: Contact us with your questions (jgi-jira+pmosup[email protected]) Carefully read our proposal call description … and relevance to the DOE’s mission.  Have someone proofread your proposal to make sure the goals, experimental … built. We recommend exploring how KBase (www.kbase.us) can support biological data analysis. It is a free, open source …
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Panel Discussion: Launching & Sustaining Startups in Synthetic Biology
… presents… Eyes on the Prize – Launching & Sustaining Startups in Synthetic Biology Who’s Invited? All Berkeley Lab … panel discussion with local industry leaders: Arvind Gupta , Managing Director and Founder, Indie Bio John Cumbers … panel discussion  here . Contact  Robin Johnston for followup questions.     …
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A Step Toward Controlling Soybean Rust
… causes Asian Soybean Rust (ASR) and is the major pathogen of soybean. Left uncontrolled, soybean rust could reduce crop yields by as much as 90 percent. As part of the DOE Joint Genome Institute’s  2016 Community Science Program portfolio , Sebastien Duplessis of the French National Institute for Agricultural …
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Tracking the Origins of Methane-Producing Microbes
… Mini-Metagenomics Approach Helps Identify Novel Archaeal Methane … archaea are estimated to produce 500 million tons of methane a year, which is over half the total global … now suggest the gene cluster predates this microbial group. Recently published in the Proceedings of the National …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… tiny algae. The cold polar oceans give rise to some of the largest food webs on Earth. And at their base are … is displacing these important cold-water communities of algae with warm-adapted ones, a trend that threatens to … they sharply delineated into two big geographical groups: those in colder, polar waters, and those in warmer, …
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Green Algae Reveal One mRNA Encodes Many Proteins
… a single protein. Recently reported in the Proceedings of the National Academy of Sciences , a team of researchers has found numerous examples of polycistronic … National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy generation …
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Webinar: Introducing the BioSANS capability
… on “Integrated Multi-omics Analyses for the Prediction of Metabolic Flux in. Lignin Conversion”       … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science … National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy generation …
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Promoting the Power of Viral Metagenomics
… An article summarizing the field of viral metagenomics, authored by JGI researchers Lee Call,  Stephen … a postdoctoral fellow in the JGI Microbiome Data Science Group led by Kyrpides. Since early 2020, people all over the … National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy generation …
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Anuvia taps JGI for expertise to pinpoint products from beneficial soil microbes
… The practices that support agriculture – such as efficiently using dwindling … restoring and maintaining healthy soils – are at the heart of sustaining food and bioenergy security for a steadily … soil enrichment, is partnering with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office …
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