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Complete genome sequence of the thermophilic, hydrogen-oxidizing Bacillus tusciae type strain (T2T) and reclassification in the new genus, Kyrpidia gen. nov. as Kyrpidia tusciae comb. nov. and emendation of the family Alicyclobacillaceae da Costa and
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Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305T), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended
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Learning to Look
… Machine learning approach significantly expands inovirus … by scientists at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … are filamentous viruses with small, single-stranded DNA genomes and a unique chronic infection cycle. “We’re not …
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Inaugural Critical Minerals & Materials Joint Research Portfolio Announced
… Pictured from left: [Top row]: Romy Chakraborty, Dawn Chiniquy, Anne Glaesener, Steven Hallam, Marc Hanikenne, …   A total of 20 proposals were selected by the Joint Genome Institute (JGI) and the Molecular Foundry (TMF) for … involving critical minerals and materials. The Joint Genome Institute and Molecular Foundry are DOE Office of …
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How Maize Makes An Antibiotic Cocktail
… Maize produces a family of compounds that protects it against infections — using surprisingly few enzymes. The Science … synthesized by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … 1758976 to E.S. and P.Z.) for diterpenoids, by a DOE Joint Genome Institute Community Science Program (JGI-CSP) grant …
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New Research Sheds Light on Diversity in the Deep Sea
… Microbial communities living near hydrothermal deep-sea vents hold vast potential for … Scientists with the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … contributed metagenomic sequencing to the study as well as  genome analysis, providing authors a more complete picture …
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Genome sequences of key bacterial symbionts of entomopathogenic nematodes: Xenorhabdus cabanillasii DSM17905, Xenorhabdus ehlersii DSM16337, Xenorhabdus japonica DSM16522, Xenorhabdus koppenhoeferii DSM18168, and Xenorhabdus mauleonii DSM17908
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Virus Discoveries that Keep Getting Bigger
… Sequence-based studies — from metagenomics to single-cell work — have quickly accelerated understanding of … Nucleocytoviricota , these giant viruses boast larger genomes than many bacteria. Until recently, understanding of … culture-independent approaches to gain insight into the  genomes of giant viruses. In a new review, researchers from …
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JGI Workshop at SIMB NP Meeting
… and their biosynthetic logics to be understood, accessing these untapped metabolic capabilities is often tedious … a given BGC in various hosts, availability of sequenced genomes, and computing resources needed to predict BGCs from available genome sequences. The DOE Joint Genome Institute (JGI), a …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… gas, regulate Earth’s climate. Most methane is produced in environments without oxygen through a process called … enabled by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … the original methanogens were, but they were discovered by genome sequencing, which is a much less biased approach to …
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A Step Toward Controlling Soybean Rust
… The United States  is the world’s leading soybean producer , and soybeans are used to produce … yields by as much as 90 percent. As part of the DOE Joint Genome Institute’s  2016 Community Science Program portfolio … Research (INRA)  proposed sequencing a reference genome for  P. pachyrhizi to develop better strategies to …
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Boosting Small Molecule Production in Super “Soup”
… Do metabolic pathways from engineered yeasts still work in cell-free environments? … Program at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … he added. “It wasn’t a proven premise that if you rewire a cell in vivo that you’re going to get that same type …
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