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Draft genomes and assemblies of the ectomycorrhizal basidiomycetes Scleroderma citrinum hr and S. yunnanense jo associated with chestnut trees
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Draft genome sequence of Dolosicoccus paucivorans DSM 15742T isolated from a patient's blood in Cleveland, Ohio.
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An RNA ligase partner for the prokaryotic protein-only RNase P: insights into the functional diversity of RNase P from genome mining
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Draft genome sequence of Muricoccus roseus DSM 14916T, isolated from a children’s care center in Finland
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Diversity of Sordariales Fungi: Identification of Seven New Species of Naviculisporaceae Through Morphological Analyses and Genome Sequencing
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… at work around the globe Keynote Talk Title : “Wild Microbial Ecology” Microbial ecologist  Bruce Hungate , of … address of the 2023 JGI Annual Meeting. As the JGI’s Metagenome Science Program Head, Emiley Eloe-Fadrosh, introduced … on viruses, Holmes was part of  the initial release the genome sequence for SARS-CoV-2 , back in January of 2020. …
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SPRUCE-ing Up Science
… one of the first students to participate in the DOE Joint Genome Institute (JGI)-UC Merced internship program, … of biology and computer science, to reveal clues about how microbial and bacteria communities influence the … New Phytol. 2022 Jun;234(6):2111-2125. doi: 10.1111/nph.18072.   Byline: Ashleigh Papp …
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An Enzyme System to Help Catalyze Bioproduction of Plastic
… they worked with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … how such inter-Facility collaborations through the Genomes to Structure and Function focus area of the JGI’s … ecosystem. “At JGI, we’ve done the synthesis, metagenome mining, all the way from sequencing to functional …
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Methane Makers in Yosemite’s Lakes
… and met local wildlife (a marmot!) as they’ve sampled the microbial communities living in the mountaintop lakes of the …
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iPHoP: A Matchmaker for Phages and their Hosts
… opens the possibility of using phages to engineer microbial communities. One day, these phages could boost … led by scientists at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … different routes. To train the model, the team used 1,870 known virus-host pairs to generate a matrix of data …
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JGI@25: Solving the Mystery of the Missing Oil
… also helped track and characterize the shifting waves of microbial communities involved in removing different … with the JGI successfully simulated how successive waves of microbial populations degraded the dispersed oil.   Terry …
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Mining Metagenomes for Cas Proteins
… was made possible by mining the datasets in the Integrated Microbial Genomes and Microbiomes (IMG/M) suite of tools managed by … is now at Tel Aviv University. The Cas14 proteins are ~400–700 amino acids (aa) in size, half that of previously known … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is …
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