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Trent Northen
… is currently a Senior Staff Scientist at Berkeley Lab. Since joining Berkeley Lab in 2008, Dr. Northen has had … Northen’s research is focused on using metabolomics to link genomes with environments to understand how webs of microbes … of the Division in 2015-2016. Dr. Northen regularly chairs workshops, organizes conference sessions, and serves on …
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JGI User Executive Committee Expands
Committee (UEC) of the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User … cell wall to address dairy sustainability challenges. She’s worked with the JGI on poplar and sorghum projects, …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
Puerto Nuevo is a small town along the Baja California coastline in Mexico. While conducting early field studies related … internship for helping lay the foundation for her graduate work. “Being a JGI-UC Merced Intern during the summer of my … I especially want to emphasize the inclusive, collaborative working environment I have consistently experienced each …
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Marcel Huntemann
Marcel is in charge of several production pipelines (gene calling, … annotation and methylomics) that run on microbial genomes and metagenomes. He also works on automating intra-department data exchange and …
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IMA genome-F18
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JGI@25: Cow Rumen and the Early Days of Metagenomics
In honor of the JGI's 25th anniversary in 2022, we have … coherent pieces called contigs — into genes and even into genomes — from these environmental samples,” said Matthias … how JGI data supports higher education in this JGIota , a Genome Insider podcast minisode.)  “The ultimate target has …
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JGI Announces 2023 Community Science Program Awardees
Program call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Laboratory (Berkeley Lab). “We’re very excited to start working with this years’ crop of CSP recipients, over half …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who … and coordinates the development of the virus and plasmid workflows for the National Microbiome Data Collaborative.  …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
In honor of the JGI's 25th anniversary in 2022, we have … Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. Along … the world, finding over 125,000 partial and complete viral genomes. That study multiplied the number of known viral …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
A two-day kick-off meeting held at Lawrence Berkeley National Laboratory (Berkeley … Research Center One Health Ruhr (OHR), and the DOE Joint Genome Institute (JGI), Molecular Biophysics and Integrated … knowledge and address global challenges.”  During the workshop UDE and Berkeley Lab scientists discussed a diverse …
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Daniel Udwary
… for JGI’s Secondary Metabolites group. His research interests lie in use and development of bioinformatics tools for elucidation of biosynthetic gene …
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JGIota: Looking Back at Methane-Making Microbes
We count on livestock for food and fiber, but raising these animals also produces an atmosphere-warming gas: methane. Those emissions mainly come from gut microbes — the bacteria and archaea …
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