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Identifying the Microbial Cleanup Crew at a Superfund Site
… PCE (perchloroethylene) found its way into the groundwater of several communities in New Mexico via leakage from a … break down PCE into the chemical compound ethene. Applying genome sequencing and analysis, the researchers identified other … ) conducted by the U.S. Department of Energy Joint Genome Institute (JGI) ( …
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Defining a Pan-Genome for Antarctic Archaea
… Analysis of haloarchaeal metagenomes broadens understanding of Antarctic biogeography. … hypersaline Antarctic lakes. The Impact By collecting and sequencing dominant haloarchaeal sequences from six … (project 4031). The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both … I’m Alison Takemura at the US Department of Energy Joint Genome Institute, or JGI.  Two special days occur in April: … all sorts of other intermediate phenotypes where plants are using a little bit of both of the pathways.  ALISON: …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… Over the last year, we’ve been revisiting a number of notable achievements that showcase our collaborations and …   Usually, plants have the upper hand against any kind of biomass breakdown. They’ve spent millions of years … sample, or a rumen sample, you’re going to find beautiful diversity.”  Within that diversity of bacteria and fungi, …
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Consortia of low-abundance bacteria drive sulfate reduction-dependent degradation of fermentation products in peat soil microcosms
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Fungus Fuels Tree Growth
… start pinning down how a fungal symbiont spurs growth of poplar, a potential biofuel feedstock.     The Science … larger by dry weight than without PM193  . By contrast, using a different endophytic fungus,  Ilyonectria europaea , … partnered with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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A near complete snapshot of the Zea mays seedling transcriptome revealed from ultra-deep sequencing
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Metagenome, metatranscriptome and single-cell sequencing reveal microbial response to Deepwater Horizon oil spill
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An atlas of over 90,000 conserved noncoding sequences provides insight into crucifer regulatory regions
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Contrasting Patterns of Sequence Evolution at the Functionally Redundant bric à brac Paralogs in Drosophila melanogaster
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Sequence variants in the HLX gene at chromosome 1q41‐1q42 in patients with diaphragmatic hernia
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Integrated analysis of homozygous deletions, focal amplifications, and sequence alterations in breast and colorectal cancers
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